PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006234.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 413aa MW: 47699.8 Da PI: 6.1609

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006234.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.1	1.2e-07	68	121	40	90
FAR1 40 kreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ ++ + +++ + ++++rtg +a++ +k+++++ +ev ++e+eHnH+++ Cse_sc006234.1_g080.1 68 QNPKTYANsliESTGKCVTTSKRTGFEAHIILKLNHNNMYEVVEFEEEHNHSMV 121 444444445556667778899******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MSDAQSENDA TNNMITDDID VDHVSYIESV PEPQSVGNVH VTPRGSRYWT PIFPGNEKPV 60 EKMFKEGQNP KTYANSLIES TGKCVTTSKR TGFEAHIILK LNHNNMYEVV EFEEEHNHSM 120 VQKDDSHFLN SQRQLNFCQK QTLMDVGNLN MGPRKGFKVL KQVRGSFDKV GAIETDSKNY 180 KRDVDLFIGE GDAHMAIEKL EEKKELFSDF SYEFMQGEDK KLSGLFWADE TAKRNYIAFG 240 DIVEFDATFR TNKYFTGIVN HNRCVTFGAD LLSNESVDSY EWLLRSFNKT MSHEPKLLVT 300 DQDVSIKLAI PKVFTTAKQR LFMWHITEKF GDKFGSTLCK SGFLHHINDI VWSKTLTSDQ 360 FELTWASLMN EYDQQEHKWL TNMYNIRNKW ISSYFRDLPI AGVVKEKIIS LAF

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MSDAQSENDA TNNMITDDID VDHVSYIESV PEPQSVGNVH VTPRGSRYWT PIFPGNEKPV  60
EKMFKEGQNP KTYANSLIES TGKCVTTSKR TGFEAHIILK LNHNNMYEVV EFEEEHNHSM  120
VQKDDSHFLN SQRQLNFCQK QTLMDVGNLN MGPRKGFKVL KQVRGSFDKV GAIETDSKNY  180
KRDVDLFIGE GDAHMAIEKL EEKKELFSDF SYEFMQGEDK KLSGLFWADE TAKRNYIAFG  240
DIVEFDATFR TNKYFTGIVN HNRCVTFGAD LLSNESVDSY EWLLRSFNKT MSHEPKLLVT  300
DQDVSIKLAI PKVFTTAKQR LFMWHITEKF GDKFGSTLCK SGFLHHINDI VWSKTLTSDQ  360
FELTWASLMN EYDQQEHKWL TNMYNIRNKW ISSYFRDLPI AGVVKEKIIS LAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-51	FAR1 family protein