PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006079.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 267aa MW: 30212.6 Da PI: 7.2189

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006079.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.8	2.1e-37	43	98	5	60
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++cprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG++rn+PvGg +rknkk Cse_sc006079.1_g020.1 43 PVRCPRCDSTHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTIRNIPVGGVSRKNKK 98 579***************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MQPSLKLENT SFPSSPSQPT TEPMAKRPRP HQDPDQDQDE AVPVRCPRCD STHTKFCYYN 60 NYSLSQPRYF CKSCRRYWTK GGTIRNIPVG GVSRKNKKLR YHNVRELQRQ QKYENEVQHT 120 YKESHELANS SRPMFSAYPD FMFENLTINF MESGQNGGDN AEFENGDHFP VMVPTHGYEA 180 DTRNTYGLTP FGDMMTYYHD YFNKTVSLDD IKPKLFECGK LDQTCCHSDP FGLGVGGNGS 240 SGSLLGLGSS WAGLMNGYGS SSTNPLV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	30	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-32	Dof family protein