PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006056.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1233aa MW: 139700 Da PI: 6.2621

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006056.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	23.8	8.6e-08	1065	1106	3	44
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 e+s ed+++++ +++++AA eLgv+l++LKr+ ++G++ W Cse_sc006056.1_g030.1 1065 IELSREDIEQHYGKTMRKAAEELGVSLSTLKRKHNKLGMSGW 1106 57999*****************************99999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 1233 aa Download sequence
MANWFPKEGP SGFLESFPTY RLHSSKPQSF FNGLWVFSSK DEGYESKSYS SDDAGTRMMI 60 RAKILSAFSK MNYSSLIAQF WAPVTIGGKH LLSTSGQPFA VSYLGSDALK KYRILCVELV 120 YDVDANSKFR GRPASAFLNR FPEIASMDPS VHHEVDPFLR NAFQECGLDS SVMIPIFCPS 180 QTSSSSDCIG VIECSTWSPS PVDLFNEMNM KIKVGSGSEC AQCPRSYTIQ GKYAFCKYAH 240 NNKLELSSFV TSLSYCEKLH VYKYFTLVKQ TINGLKLARD QIQEALKIVC QSHHITLAQV 300 WMASLDENHV HFSSSLEEAQ TRRLSGLKLT GYKNIDEDSI DEYSIDENIE ERCWLFQNYY 360 DACDLIPLQP GEEFILKTLQ DYEPRFCKNI SKLGIYKLMG LDQYAAIHGS MGLTICMRSI 420 HTGDFNYVFE FLWTHNSFNP ILLEEILLNI KRCLPSFKFA SGAEIGDKLN AIEVDNSTDK 480 EIKKFDIFQS KRLSPIPEAL KEGKKQVAVD YIAPLATKCK PAPVLTPQQV IEQQFGTSTT 540 ENFIAAENIF DKGDVSDFLE TLPTCILHKK PETEGALWVF CSEDEGSQKN LSSGDLGTRM 600 IHNKIKSAFS KVSNGGELIV QFWAPITSGN RLVLTTSGQP FAVSVFGEGL KEYRGRCVGY 660 ECNIGINNDN NKVIKDDIEQ HEDHHPMTMI SGPPSNAFLN RLPEAVLDTK NHREGSLMRC 720 ASDCGLWTSY TLPIGCPSQY YSSCIGVVEC SSISSINLEI VNTMNRALEQ EGLNVFNVQD 780 RIPYNVRISK YLIXVRDEIQ VALKSVCESH KIGVAQVWIS YEDENHVPFS FSSEDTQTTR 840 RLALKLTGYN SVSYEDENHV PFSFSSEDTQ TTRRLALKLT GYNSVDEDST LSNWRFKEYY 900 DACDMVPLKK GEELVEKTLQ DYQPRFCENI SQLGTDTLMS WVSTDDVACS GFTICTSIGT 960 GDFNCAFEFI WHHNPNYVLL LESLLLTLKR HLPRMKFASF ASGAKLGDQL RVIDIDNSTK 1020 SERKFFEIFK EKRLSPIPEA MNKGKKAIVV NYNALSKEKR DTKEIELSRE DIEQHYGKTM 1080 RKAAEELGVS LSTLKRKHNK LGMSGWQGPD LPQRKAYKSN KNQINESHIH EKDNGVIQDP 1140 SPVKRNENTV IKVEYADDII KIRLYNSEAT FVTVENEIGK KFKLKHGTFK IKYRDEDEEW 1200 ILMTSDEDMS DCIQNSRNVD RSAVRLHVLL HNQ

Sequence ? help Back to Top

Protein Sequence Length: 1233 aa Download sequence

MANWFPKEGP SGFLESFPTY RLHSSKPQSF FNGLWVFSSK DEGYESKSYS SDDAGTRMMI  60
RAKILSAFSK MNYSSLIAQF WAPVTIGGKH LLSTSGQPFA VSYLGSDALK KYRILCVELV  120
YDVDANSKFR GRPASAFLNR FPEIASMDPS VHHEVDPFLR NAFQECGLDS SVMIPIFCPS  180
QTSSSSDCIG VIECSTWSPS PVDLFNEMNM KIKVGSGSEC AQCPRSYTIQ GKYAFCKYAH  240
NNKLELSSFV TSLSYCEKLH VYKYFTLVKQ TINGLKLARD QIQEALKIVC QSHHITLAQV  300
WMASLDENHV HFSSSLEEAQ TRRLSGLKLT GYKNIDEDSI DEYSIDENIE ERCWLFQNYY  360
DACDLIPLQP GEEFILKTLQ DYEPRFCKNI SKLGIYKLMG LDQYAAIHGS MGLTICMRSI  420
HTGDFNYVFE FLWTHNSFNP ILLEEILLNI KRCLPSFKFA SGAEIGDKLN AIEVDNSTDK  480
EIKKFDIFQS KRLSPIPEAL KEGKKQVAVD YIAPLATKCK PAPVLTPQQV IEQQFGTSTT  540
ENFIAAENIF DKGDVSDFLE TLPTCILHKK PETEGALWVF CSEDEGSQKN LSSGDLGTRM  600
IHNKIKSAFS KVSNGGELIV QFWAPITSGN RLVLTTSGQP FAVSVFGEGL KEYRGRCVGY  660
ECNIGINNDN NKVIKDDIEQ HEDHHPMTMI SGPPSNAFLN RLPEAVLDTK NHREGSLMRC  720
ASDCGLWTSY TLPIGCPSQY YSSCIGVVEC SSISSINLEI VNTMNRALEQ EGLNVFNVQD  780
RIPYNVRISK YLIXVRDEIQ VALKSVCESH KIGVAQVWIS YEDENHVPFS FSSEDTQTTR  840
RLALKLTGYN SVSYEDENHV PFSFSSEDTQ TTRRLALKLT GYNSVDEDST LSNWRFKEYY  900
DACDMVPLKK GEELVEKTLQ DYQPRFCENI SQLGTDTLMS WVSTDDVACS GFTICTSIGT  960
GDFNCAFEFI WHHNPNYVLL LESLLLTLKR HLPRMKFASF ASGAKLGDQL RVIDIDNSTK  1020
SERKFFEIFK EKRLSPIPEA MNKGKKAIVV NYNALSKEKR DTKEIELSRE DIEQHYGKTM  1080
RKAAEELGVS LSTLKRKHNK LGMSGWQGPD LPQRKAYKSN KNQINESHIH EKDNGVIQDP  1140
SPVKRNENTV IKVEYADDII KIRLYNSEAT FVTVENEIGK KFKLKHGTFK IKYRDEDEEW  1200
ILMTSDEDMS DCIQNSRNVD RSAVRLHVLL HNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-15	Nin-like family protein