PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005955.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 976aa MW: 109415 Da PI: 5.8394

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005955.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	171.4	1.3e-53	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e + rwlk+ e++ iL+n+e+ +lt+e++++p+sgsl+L+n++++r+frkDG++w++kkdg+tv E+he+LKvg+ve+l+cyYah+e Cse_sc005955.1_g050.1 13 REaHVRWLKPGEVLFILQNYEESQLTHEPPQKPPSGSLFLFNKRVLRFFRKDGHNWRRKKDGRTVGEAHERLKVGNVEALNCYYAHGE 100 55589********************************************************************************* PP CG-1 90 enptfqrrcywlLeeelekivlvhyle 116 +n++fqrr+yw+Le+ +++ivlvhy++ Cse_sc005955.1_g050.1 101 INQNFQRRSYWMLEQGMDHIVLVHYRD 127 ***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MMTSGYNIMD LVREAHVRWL KPGEVLFILQ NYEESQLTHE PPQKPPSGSL FLFNKRVLRF 60 FRKDGHNWRR KKDGRTVGEA HERLKVGNVE ALNCYYAHGE INQNFQRRSY WMLEQGMDHI 120 VLVHYRDINM SGRSPGSISS LSTGSSTLIQ GSSSYASQFT QSAAAFSQYR EPYDNTSSPS 180 SIEVSSDVIT RSNGASPFSL TEGAEGSGGS PNFEVDQALR RIEEQLSLGE ENLKDISGFY 240 NVNEFANELG YSVNEHNYGG SQATQDVSNS FASEQYPGGY MRPQQYQQQS EGEFPIPTQQ 300 DLIWNDVLKD NGNAVGDVPQ KNHAYPSDRN GVPLPLPRRD PVEEQQKYNS GYVDANNDSS 360 VLLPHELEDF RFPAYTPARN LSESYPDFYS SLFDQGQSGM PLESDSSLTI AQEQKFTIRE 420 ISPDWGYSSE TTKVLIIGTF THDQSKREWY CMFGDTEVPV EIIQDGVLCC YTPPSLPGKV 480 TLCITSGNRE SCSEIREFEY RDKPTTYINN NPPDKKSRTS EELLLLVRFV QMLLLDQVKQ 540 KEGKTSIDLL TGSMASEDSW AQIIEALLDG SLGSSNTTEW LLEELLKDKL QRWLSFRLQD 600 NSDAPALSKR EQGIIHMVSG LGFGWALTPI LKSGVGVNFR DINGWTALHW AARFGREKMV 660 AELLAAGASA GAVTDPSHLD PTGKTPASIA ATCGHKGLAG YLSEVSLTSH PSLQLHQTEM 720 ARNSADIEAE RAAVDSISKL NLVSKEDLSL KDTLAAVRNA TQAAARIQSA FRAHSFRKRQ 780 QKETDEYGSS DEYGILPSDI EGLSAVSKLT FRSGNDHNAA LSIQKKYRGW KGRKDFLSLR 840 QKVVKIQAHV RGHQVRKHYK VFCWAVGIVE KVVLRWRRKG VGLRGFKQEL AALDESEDED 900 IVKVFRKEKV DVSIDEAVSR VLSMVDSQQA REQYRRMLQK YRQAKVAERE GLESETASTS 960 QGDVMNTEDD NLNQFV

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MMTSGYNIMD LVREAHVRWL KPGEVLFILQ NYEESQLTHE PPQKPPSGSL FLFNKRVLRF  60
FRKDGHNWRR KKDGRTVGEA HERLKVGNVE ALNCYYAHGE INQNFQRRSY WMLEQGMDHI  120
VLVHYRDINM SGRSPGSISS LSTGSSTLIQ GSSSYASQFT QSAAAFSQYR EPYDNTSSPS  180
SIEVSSDVIT RSNGASPFSL TEGAEGSGGS PNFEVDQALR RIEEQLSLGE ENLKDISGFY  240
NVNEFANELG YSVNEHNYGG SQATQDVSNS FASEQYPGGY MRPQQYQQQS EGEFPIPTQQ  300
DLIWNDVLKD NGNAVGDVPQ KNHAYPSDRN GVPLPLPRRD PVEEQQKYNS GYVDANNDSS  360
VLLPHELEDF RFPAYTPARN LSESYPDFYS SLFDQGQSGM PLESDSSLTI AQEQKFTIRE  420
ISPDWGYSSE TTKVLIIGTF THDQSKREWY CMFGDTEVPV EIIQDGVLCC YTPPSLPGKV  480
TLCITSGNRE SCSEIREFEY RDKPTTYINN NPPDKKSRTS EELLLLVRFV QMLLLDQVKQ  540
KEGKTSIDLL TGSMASEDSW AQIIEALLDG SLGSSNTTEW LLEELLKDKL QRWLSFRLQD  600
NSDAPALSKR EQGIIHMVSG LGFGWALTPI LKSGVGVNFR DINGWTALHW AARFGREKMV  660
AELLAAGASA GAVTDPSHLD PTGKTPASIA ATCGHKGLAG YLSEVSLTSH PSLQLHQTEM  720
ARNSADIEAE RAAVDSISKL NLVSKEDLSL KDTLAAVRNA TQAAARIQSA FRAHSFRKRQ  780
QKETDEYGSS DEYGILPSDI EGLSAVSKLT FRSGNDHNAA LSIQKKYRGW KGRKDFLSLR  840
QKVVKIQAHV RGHQVRKHYK VFCWAVGIVE KVVLRWRRKG VGLRGFKQEL AALDESEDED  900
IVKVFRKEKV DVSIDEAVSR VLSMVDSQQA REQYRRMLQK YRQAKVAERE GLESETASTS  960
QGDVMNTEDD NLNQFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein