PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005949.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 320aa MW: 34519.9 Da PI: 9.3148

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005949.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.1	1.9e-38	78	137	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e l+cprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Cse_sc005949.1_g010.1 78 EPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSN 137 56789****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MVFSSVTPFL DQHNWHQQLQ QSNLQQGNGG GGENPSFQSP PVPAQHGSNG GPGGSGEGSV 60 RPGSMVDRAR IAKLPMPEPG LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGA 120 LRNVPVGGGC RRNKRSNKNS TRSKSPSQKA LSGSPSRSDN IATSTQLPHP PSLQLPFMSS 180 YGGIAGNITS NLAGFHPQNE MGNNFQLGSG STNGNNFSNI LSIGSGESWR LPFLAGFEVP 240 NNTNLFHYQS EGTVEAPASS IIDNSQTDPP VKVEENRGLN ISRQTIGMSE NTNQQPWQAG 300 NNWAEFSSVN STSTPTANFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-40	Dof family protein