PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005803.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 258aa MW: 29459.9 Da PI: 6.1727 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.2 | 2.8e-18 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ +++++LA+ lgL+ rqV +WFqNrRa++k Cse_sc005803.1_g050.1 65 KKRRLNLEQVKALEKSFELGNKLEPDRKRQLARALGLQPRQVAIWFQNRRARWK 118 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.6 | 6e-42 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 ekkrrl+ eqvk+LE+sFe +kLep+rK +lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++d++k++n++L++++++L+ Cse_sc005803.1_g050.1 64 EKKRRLNLEQVKALEKSFELGNKLEPDRKRQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYNVLKRQFDNIKADNDALKNHNKKLH 151 69************************************************************************************** PP HD-ZIP_I/II 89 eelke 93 ++l++ Cse_sc005803.1_g050.1 152 AQLMA 156 *9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MSFLPPEPMF FGYEDPHHNP HHYQGVEPLM LSRSMSYNGR EGCEEINVGG DAETSDDEGS 60 QLGEKKRRLN LEQVKALEKS FELGNKLEPD RKRQLARALG LQPRQVAIWF QNRRARWKTK 120 QLEKDYNVLK RQFDNIKADN DALKNHNKKL HAQLMALKVQ ESNGIRAMMN LNKETEGSWS 180 NGSENSCEDN STIFYSQISN NIHSNSSIIG GLTPQYLLGQ PLNQTTVTGD EGFCNMLNVI 240 EDQPAFWAWP EAEPRNLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 121 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-69 | HD-ZIP family protein |