PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005700.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 329aa MW: 37213.3 Da PI: 7.3807

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005700.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	75.5	6.4e-24	126	186	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYG K + +s+fpr YYrCt+ gC++kk+v++ +++p+ + itY g H+++ Cse_sc005700.1_g030.1 126 EDCYQWRKYGHKAILNSKFPRCYYRCTHMndqGCQAKKHVQQLEDEPNKFRITYFGGHTCT 186 79************************88889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEKNNNTLIQ TLIRGRNSAK RLRKMLCGET NDDHVSVSVD DLLTEVSNSF ANGLSMLSTS 60 RSEVHQESEV FKRNSEKTST QGQSFSVDAN LSRNNEKTPL VLAKQGRGQY KRKSGDARVE 120 ISNISEDCYQ WRKYGHKAIL NSKFPRCYYR CTHMNDQGCQ AKKHVQQLED EPNKFRITYF 180 GGHTCTMTPH NDHIVPHHGH GVFLNFEGFK NQQSLTTNSS TTKKIGDKPS RKQKDHANAT 240 PGSDQAGSSH SVMSDYLQDM DFVESEDILS AWFAEAALID GEYCNTQLES HCSDFVFEVM 300 RKQDQTRLTE LAAKKANQEA IQANFDIIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	8e-27	WRKY family protein