PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005457.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 785aa MW: 89569.2 Da PI: 6.1066

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005457.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.0004	134	180	6	32
HHHHHHHHHHHHHHHHHHHCTSCC.C..................... CS HLH 6 nerErrRRdriNsafeeLrellPk.as...................k 32 ++E+r+R ++ + f+ r+ lP+ ++ + Cse_sc005457.1_g040.1 134 AIVEQRYRTNVGDLFAHVRKKLPWaDPkivkqlidsklyallgektA 180 689*********************55466666666666666666661 PP

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence
MVEALDLFLK IGLDERTAKN TIANNKVTAN LLAVINEAAV TDGCDRSTGN LLYTVATKFP 60 ANALVHRPKL LEYIVSAKIK TPAQLEAAFT FVTVTGSDDL DINKFEEACG VGIEVSLEDM 120 EHAVDEIFEE KKSAIVEQRY RTNVGDLFAH VRKKLPWADP KIVKQLIDSK LYALLGEKTA 180 ADNEKPVKKK KEKPAKVEDK GTTKEAPEAV PSEELNPYLI FPAPEENYKV QFFFLLSFLS 240 VHTEVFFSDR PVLRACNSKA ILEKHLKTTG GMVLTRFPPE PNGYLHIGHA KAMFVDFGLA 300 KDRGGGCYLR FDDTNPEAEK KEYIDHIEEI VGWMGWKPFK ITYTSDYFQD LYDLAVELIR 360 RGCAYVDHQT GDEIKEYREK KMNSPWRDRP ISESLKLFND MKEGRIDEGK ATLRMKQDMQ 420 SDNGNMYDLI AYRIKATLTD APFCMDPQFT PHPHAGDKWC IYPSYDYAHC IVDSLENITH 480 SLCTLEFETR RASYYWLLDA LSLYQPYVWE YSRLNITNTV MSKRKLNRLV TENYVDGWDD 540 PRLMTLAGLR RRGFTSTAIN TFVRGIGITR SDGSMIRLER LEYHVREELN KTASRTMVVL 600 HPLKVVITNL ESSSVIDLDA KKWPDAPNDD ASSYYKVPFS NVVYIEQTDF RLKDSKDYYG 660 LAPGKTVLLR CGVLHWVAEP SPGVDPLKVE VRLFDKLFKS ENPGELDNWL DDLNPESKVV 720 IPCAYGVPSL KFAEVEDKFQ FERLGYFVAD KDSTPEKLIF NRIVTLRDTY KPGSEKAASH 780 QRLYG

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence

MVEALDLFLK IGLDERTAKN TIANNKVTAN LLAVINEAAV TDGCDRSTGN LLYTVATKFP  60
ANALVHRPKL LEYIVSAKIK TPAQLEAAFT FVTVTGSDDL DINKFEEACG VGIEVSLEDM  120
EHAVDEIFEE KKSAIVEQRY RTNVGDLFAH VRKKLPWADP KIVKQLIDSK LYALLGEKTA  180
ADNEKPVKKK KEKPAKVEDK GTTKEAPEAV PSEELNPYLI FPAPEENYKV QFFFLLSFLS  240
VHTEVFFSDR PVLRACNSKA ILEKHLKTTG GMVLTRFPPE PNGYLHIGHA KAMFVDFGLA  300
KDRGGGCYLR FDDTNPEAEK KEYIDHIEEI VGWMGWKPFK ITYTSDYFQD LYDLAVELIR  360
RGCAYVDHQT GDEIKEYREK KMNSPWRDRP ISESLKLFND MKEGRIDEGK ATLRMKQDMQ  420
SDNGNMYDLI AYRIKATLTD APFCMDPQFT PHPHAGDKWC IYPSYDYAHC IVDSLENITH  480
SLCTLEFETR RASYYWLLDA LSLYQPYVWE YSRLNITNTV MSKRKLNRLV TENYVDGWDD  540
PRLMTLAGLR RRGFTSTAIN TFVRGIGITR SDGSMIRLER LEYHVREELN KTASRTMVVL  600
HPLKVVITNL ESSSVIDLDA KKWPDAPNDD ASSYYKVPFS NVVYIEQTDF RLKDSKDYYG  660
LAPGKTVLLR CGVLHWVAEP SPGVDPLKVE VRLFDKLFKS ENPGELDNWL DDLNPESKVV  720
IPCAYGVPSL KFAEVEDKFQ FERLGYFVAD KDSTPEKLIF NRIVTLRDTY KPGSEKAASH  780
QRLYG