PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005424.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 294aa    MW: 32274.9 Da    PI: 9.9584
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005424.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.7e-1394138347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ l++ + +  G+g+W+ I+r + k+Rt+ q+ s+ qky
  Cse_sc005424.1_g040.1  94 PWTEEEHRLFLIGLQNVGKGDWRGISRNFVKTRTPTQVASHAQKY 138
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAFEPGKWSD STNGDGELSV NNNGNHGKSI MLFGVRLMEG GGSGSGGFRK SVSMNNLAQF  60
DEQPPDSNLD ATGYASDDVV HPSARSRERK RGVPWTEEEH RLFLIGLQNV GKGDWRGISR  120
NFVKTRTPTQ VASHAQKYFL RRTNHNRRRR RSSLFDITTD TCMTSSMDDD QKLPSTLKYE  180
PEKFPISSFP STRLESLTLG RAPTAKQVTK TLGNQMPPIP IPPSNKMAKL NLITTNDNLE  240
PPLPLTLNLS TSTPSTSSEQ QSSPSSSTRH TVATFQEISG SFNSSNGDNI ISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.29e-60MYB_related family protein