PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005384.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 297aa MW: 33155 Da PI: 7.0394 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75 | 9.6e-24 | 114 | 174 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqKe+ +s++pr Y+rCt++ gC+++++v++ ++ ++ +itY g+H+++ Cse_sc005384.1_g030.1 114 VDGYAWRKYGQKEILNSKYPRCYFRCTYKpahGCKAQRQVQKLDDGSDMYHITYFGHHTCP 174 59**************************9999************9**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MEKNNEKLIQ TLVRGKSSAK TLQNLIRKKR VNGIESGLFD DLLVDILGSF SGGLSMLGSC 60 DSGEICGVQS SPPVDPVPEA NSEKKQAPVV KERRGCYKRR KTGDSRVEIS GTIVDGYAWR 120 KYGQKEILNS KYPRCYFRCT YKPAHGCKAQ RQVQKLDDGS DMYHITYFGH HTCPSPNSFP 180 KHRAVLDFKD SKNHQYFSAS PSTITNIPIN PFVKQEVDSK DQSTDVSDNV SSANEGHSAP 240 PLGWNEVLRG DFGAPFMGFD HEEYSSASTS SHSYLMNMDF INDGELQDGF EFDYHGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 125 | KRRKTGDSRVEISGTIVDGYAWRKYGQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40750.1 | 7e-34 | WRKY family protein |