PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005384.1_g030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 297aa    MW: 33155 Da    PI: 7.0394
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005384.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY759.6e-24114174259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                             Dgy+WrKYGqKe+ +s++pr Y+rCt++   gC+++++v++ ++  ++ +itY g+H+++
  Cse_sc005384.1_g030.1 114 VDGYAWRKYGQKEILNSKYPRCYFRCTYKpahGCKAQRQVQKLDDGSDMYHITYFGHHTCP 174
                            59**************************9999************9**************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEKNNEKLIQ TLVRGKSSAK TLQNLIRKKR VNGIESGLFD DLLVDILGSF SGGLSMLGSC  60
DSGEICGVQS SPPVDPVPEA NSEKKQAPVV KERRGCYKRR KTGDSRVEIS GTIVDGYAWR  120
KYGQKEILNS KYPRCYFRCT YKPAHGCKAQ RQVQKLDDGS DMYHITYFGH HTCPSPNSFP  180
KHRAVLDFKD SKNHQYFSAS PSTITNIPIN PFVKQEVDSK DQSTDVSDNV SSANEGHSAP  240
PLGWNEVLRG DFGAPFMGFD HEEYSSASTS SHSYLMNMDF INDGELQDGF EFDYHGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198125KRRKTGDSRVEISGTIVDGYAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.17e-34WRKY family protein