PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005380.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 145aa    MW: 16505.1 Da    PI: 10.6117
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005380.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.3e-164796255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                            y+GVr +k  g+Wv+e+r+p     +  r++lg+++ta++Aa+a++ a ++++g
  Cse_sc005380.1_g040.1 47 IYRGVRSRK-FGKWVCEVRHPI----TqSRVWLGTHDTADMAARAHDVAVLAMRG 96
                           69****888.9*********72....46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MDIESHYLHQ EKLSVVQPYL EPELMLASQN PKKRGGRKKF METRHPIYRG VRSRKFGKWV  60
CEVRHPITQS RVWLGTHDTA DMAARAHDVA VLAMRGRSAC LNFADSVWRL PIPQSSDVID  120
IQKAAAVAAK SFRPIVEIVD TSRRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.18e-54ERF family protein