PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005353.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 446aa MW: 50210.4 Da PI: 4.8037

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005353.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.3	3.1e-28	170	228	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K++k++++pr+Y++Ct+ gC+vkk+ver++ed ++++ tY g Hnh+ Cse_sc005353.1_g050.1 170 LDDGYRWRKYGKKNIKSTPNPRNYFKCTTIGCKVKKRVERDREDSSYIIATYIGLHNHD 228 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
METYLNLSKL AQKSTMDAFL PLSDQDQTGN PNFSSSSFNC PSITNDDRVY DHINIDNTLY 60 YNHDLTDDNS NPNTLSLIDH QDSSSSNSLS YLNTNEQTPD HLLEITTDVN ISKWPQISAD 120 AASMTQLTWI ERQLLYDSFL LGKRSDNSNR ERLNDDTKIG FRIQTGLEVL DDGYRWRKYG 180 KKNIKSTPNP RNYFKCTTIG CKVKKRVERD REDSSYIIAT YIGLHNHDVP STTASISNVC 240 PTGGIYMVEN SRCFNHFPFR RSKYGAPPPD LKKVDIAKKK ATKVASTSET KIATFNPFAA 300 LNTIDSDECG NPTDVEDSSS TMEAKEVGSL KTGNVSQDPL VSDSMKANEV CPTPIVEKIG 360 EFEKLLIDGK ATLVDDDGNP IKKVDYQSKN KDFHSTSSTK RVNPFTKVRE IVVSDSEEEE 420 VVNTFDESRN IFGSGHDRED DYDYYD

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

METYLNLSKL AQKSTMDAFL PLSDQDQTGN PNFSSSSFNC PSITNDDRVY DHINIDNTLY  60
YNHDLTDDNS NPNTLSLIDH QDSSSSNSLS YLNTNEQTPD HLLEITTDVN ISKWPQISAD  120
AASMTQLTWI ERQLLYDSFL LGKRSDNSNR ERLNDDTKIG FRIQTGLEVL DDGYRWRKYG  180
KKNIKSTPNP RNYFKCTTIG CKVKKRVERD REDSSYIIAT YIGLHNHDVP STTASISNVC  240
PTGGIYMVEN SRCFNHFPFR RSKYGAPPPD LKKVDIAKKK ATKVASTSET KIATFNPFAA  300
LNTIDSDECG NPTDVEDSSS TMEAKEVGSL KTGNVSQDPL VSDSMKANEV CPTPIVEKIG  360
EFEKLLIDGK ATLVDDDGNP IKKVDYQSKN KDFHSTSSTK RVNPFTKVRE IVVSDSEEEE  420
VVNTFDESRN IFGSGHDRED DYDYYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	6e-29	WRKY family protein