PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005321.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 167aa    MW: 19448.2 Da    PI: 8.7155
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005321.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2156.9e-055276223
                           EET..TTTEEESSHHHHHHHHHH.T CS
                zf-C2H2  2 kCp..dCgksFsrksnLkrHirt.H 23
                           +C+   C+ +Fs+ snL++H +  H
  Cse_sc005321.1_g060.1 52 RCSfeGCKLTFSNDSNLRQHVKAaH 76
                           688889**************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MKFFTNKQCL MAHLQTCHQY INCEICGSKQ LRKNIKRHLC THEKGVSKER IRCSFEGCKL  60
TFSNDSNLRQ HVKAAHLQEK PFVCRFSDCG MRFAYKHVRD NHEKTGLHVY TVGDFVEADA  120
EFHSRPRGGT KRKLPAMIET LLKKIVHPPN GSDCHEYFSW FSGDEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.13e-62C2H2 family protein