PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005226.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 266aa MW: 29802.2 Da PI: 9.1226 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.8 | 3.5e-12 | 28 | 80 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + hn+ Er RR+r+N+ ++ L +llP++ +++kK s i+ +Av+YI +L Cse_sc005226.1_g020.1 28 KYDHNAGERDRRKRVNNLYQCLGSLLPESGDQKKKKISIPGIVSRAVKYIPEL 80 567*************************86777778**************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MHDFAPENSM SSGISANNGG AENLVVKKYD HNAGERDRRK RVNNLYQCLG SLLPESGDQK 60 KKKISIPGIV SRAVKYIPEL EKEVEALKLE KENILPFSSP MINSRQEGLA IKNQSGEGAI 120 TKRNSWLVSS VNVLGDKEVV IQLTTLTDRM STNKENGFLS KVMENLENGE YGFVLLNATT 180 MTCSREGMVL STLHLQNVTR IAKAIYQIKG TFPRSIRNPA DEYSLMTLQL VQGDHKIESE 240 RFFNVVDVMI RCTQKAGCSW ESLRMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-18 | bHLH family protein |