PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005132.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 196aa MW: 23048.3 Da PI: 7.1453 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.3 | 9.8e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skR+ngi+KKA+E+ vLCda+v+++i++s+gk+yey+s Cse_sc005132.1_g030.1 9 KRIENTSNRQVTYSKRKNGIIKKAKEITVLCDANVSLVIYGSSGKMYEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 78 | 2.4e-26 | 71 | 161 | 1 | 95 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 yq+ sg++l++ak+e+lq+e++++kke+e++q e+Rhl+Ged++sL+++eL e++Le++l++iR+kK+++ + ++k e+ l+ Cse_sc005132.1_g030.1 71 YQRLSGNKLWDAKHENLQNEIDRIKKENESMQIELRHLKGEDITSLNYEELIAYEDALENGLTNIREKKDDIPK----IMRKHEQVLE 154 7899******************************************************************9865....5666677777 PP K-box 89 eenkaLr 95 eenk L Cse_sc005132.1_g030.1 155 EENKHLM 161 7776664 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MGRGKIEIKR IENTSNRQVT YSKRKNGIIK KAKEITVLCD ANVSLVIYGS SGKMYEYCSP 60 KTNLIDMLDR YQRLSGNKLW DAKHENLQNE IDRIKKENES MQIELRHLKG EDITSLNYEE 120 LIAYEDALEN GLTNIREKKD DIPKIMRKHE QVLEEENKHL MYLVQQSEMA AMGDYQAHEP 180 FSFRVQPMQP NLHERM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 9e-84 | MIKC_MADS family protein |