PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004855.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 745aa    MW: 84134.8 Da    PI: 6.9214
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004855.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS387.91.1e-1183737431374
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            l++lL++cA+ v+++d ++a++lL++++++asp gd +qRla++f+++L+arla+++s++ k l +++t     ++ ++a++l+   s
  Cse_sc004855.1_g020.1 373 LRTLLITCAQSVAADDRRKANELLNEIRQHASPFGDGTQRLAHCFANGLEARLAGTGSQIHKGLVSKKTC---AADYIKAYHLYMASS 457
                            6789************************************************************999998...9************** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgv 174
                            P+ k+s+++ N++I++ +e++ rvHiiDf+i +G+QWp++lq +++R++gpp++RiTg++ p++g   ++++eetg+rL+ +Ae+++v
  Cse_sc004855.1_g020.1 458 PFRKISNFASNRTIMDKAEKSMRVHIIDFGILYGFQWPTFLQRISTRKSGPPHVRITGIEFPQPGfrPAQRIEETGRRLEAYAEQFKV 545
                            ****************************************************************9*********************** PP

                   GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                            pfe++  +akr+e++++eeL +k++E l+Vn+ ++ ++llde+v  +s+r+ vL+l+k+++P+++++   + ++n++ Fl+rf eal 
  Cse_sc004855.1_g020.1 546 PFEYHS-IAKRWENVKVEELMLKEDEFLVVNCLYRSKNLLDETVVADSARNIVLNLIKKINPDIFIHGILNGSYNAPFFLTRFREALF 632
                            ******.7******************************************************************************** PP

                   GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                            ++salfd+le+++pre  er+ +Ere++gre+ nv+aceg er er et+++W+ r  ++G+ pvp+s ++a+ a   ++ +++d + 
  Cse_sc004855.1_g020.1 633 HFSALFDMLETNVPRERPERMLLEREIFGREALNVIACEGWERSERPETYKQWHVRNLRVGLVPVPFSRFIATRAAEKVSLYHKD-FL 719
                            ***********************************************************************************77.** PP

                   GRAS 351 veeesgslvlgWkdrpLvsvSaWr 374
                            ++e++++l++gWk+r ++++S+W+
  Cse_sc004855.1_g020.1 720 IDEDNNWLLQGWKGRIIYAISCWK 743
                            ***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    
MDSGFGRMFG SLDGNENGNG NGNGSMPIFS DDNRTRNNGQ MFGNSFSSYD QPNNGSNRYH  60
PSSGYSQNFR GLQFGNMNNP PLPDVRGSLE DELHEDCDLS DAILGYISQV LMEEDMEDRS  120
CMLQESLDLQ AAEKPFYEVL GKKYPPSPPP WPPPEFESGL TYADHNGNGL YADSLSGSSG  180
GYAHDASILQ YFAGQNVSYA SLGSSSTGGL DSPSTADTFD LYNENQMMSQ FRKGAEEANK  240
FLPSGNLLLG SNNIGQDQKR EESILSLTKP NIRKNPYRED ITEVEKQERV IKQAAIFPDA  300
TLRSEEMDLI FLSSLGEGKV ALDSFRDTLR IEKIKDSVKD VEDTSLSNGK GKGKGRSKTR  360
GRKPKKKKEV IDLRTLLITC AQSVAADDRR KANELLNEIR QHASPFGDGT QRLAHCFANG  420
LEARLAGTGS QIHKGLVSKK TCAADYIKAY HLYMASSPFR KISNFASNRT IMDKAEKSMR  480
VHIIDFGILY GFQWPTFLQR ISTRKSGPPH VRITGIEFPQ PGFRPAQRIE ETGRRLEAYA  540
EQFKVPFEYH SIAKRWENVK VEELMLKEDE FLVVNCLYRS KNLLDETVVA DSARNIVLNL  600
IKKINPDIFI HGILNGSYNA PFFLTRFREA LFHFSALFDM LETNVPRERP ERMLLEREIF  660
GREALNVIAC EGWERSERPE TYKQWHVRNL RVGLVPVPFS RFIATRAAEK VSLYHKDFLI  720
DEDNNWLLQG WKGRIIYAIS CWKPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1362369RKPKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein