PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004706.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 311aa MW: 35824.1 Da PI: 6.8277

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004706.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	69.4	5.1e-22	128	188	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqKe++++++ r+YYrC ++ gC+++k+v++ ++dp+ ++itY+ H+++ Cse_sc004706.1_g040.1 128 DDGYEWRKYGQKEIQNAKHKRNYYRCIYKfdqGCKATKQVQKLENDPTNFKITYHQYHTCK 188 8************************99999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MEFSSWPESF SSNQIHGAFD QELVHYQQLS DTLSELFCTS QNNQADLATS YSGSNHTSEM 60 DAIACSIMSN YNVNNVPHIH KNTTCSSNGI DRLDDKKMVK TVKPVKKKRG CYTRKSSWTS 120 SKTTSWIDDG YEWRKYGQKE IQNAKHKRNY YRCIYKFDQG CKATKQVQKL ENDPTNFKIT 180 YHQYHTCKNF LRPHQIVLDS PDVNDTSILL SFVSNRLIDN KKLDHQLMPK KENEQQECLS 240 SLPLSDNQPS RFDYNGSLDL TKLVPFEHVS LTSSGLEHDG LIFSGVSSPI YETEHILEVI 300 DFNEFLYVPL C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	107	KKMVKTVKPVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	8e-24	WRKY family protein