PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004635.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 386aa    MW: 43068.4 Da    PI: 7.271
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004635.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.7e-18305338134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            C++C++ kTp+WR gp g+ktLCnaCG++y++ +
  Cse_sc004635.1_g050.1 305 CTHCQVQKTPQWRTGPLGPKTLCNACGVRYKSGR 338
                            *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MQLFSSACPN RAVGGFNMRL ATSFRALHFT QNIHDIFSLS IQTKETIIHS ALSVINIFSQ  60
EMEYCIEARA LKSSLLSQIK QNSSSSYDQE LWFNNVVVNH GSSDEFSIDD LLDLSDKEFK  120
DEEDFASVSS QDNDSCNSMN SSDFSTGDLV SLTGDDLPLP IDDMESLEWL STIVDDSMSE  180
HNTLLFPPAK LKEKEGTMNR FEPVVSVASR GFTVLGLPYP VPRKCRTKRS RKAGRVWSTG  240
SCSFTESSSN SSSSHDSSIT SPMLMMNPVY FTHLFEKQPK AKKQRKNPVQ HDGPGSSESL  300
SQRRCTHCQV QKTPQWRTGP LGPKTLCNAC GVRYKSGRLF PEYRPACSPT FSVEVHSNSH  360
RKVLEMRKKK DVEPGFVNVA VQSASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.28e-52GATA family protein