PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004611.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 338aa MW: 37633.3 Da PI: 6.1742

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004611.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	268	302	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ Cse_sc004611.1_g050.1 268 KWPYPSEAQKLALAESTGLDQKQINNWFINQRKRH 302 569*****************************885 PP
2	ELK	41.2	3.4e-14	222	243	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ Cse_sc004611.1_g050.1 222 ELKGQLLRKYSGYLGSLKQEFM 243 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MEGGDGGTSS SCLMSFGDNN HNINNNTNNN NNNIGSLCLI PISYNNNNNL IFSNNNNNCG 60 TSSSASGMML QDNNIKAKIM SHPHYPRLLS AYLNCQKIGA PPEVVERLEE ACRASVVAAM 120 SSREGGGGGS SGGGMMMVGQ DPALDQFMEA YCEMLIKYEQ ELSKPFKEAM LFLSRVESQF 180 KAISISTSDS AGGDGGLDRN GSSEEEVDVS NNLVDPQAED RELKGQLLRK YSGYLGSLKQ 240 EFMKKRKKGK LPKEARQQLL DWWTRHYKWP YPSEAQKLAL AESTGLDQKQ INNWFINQRK 300 RHWKPSEDMQ FVVMDAAHPH YFMESMLGNP YPMDVSLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	247	LKQEFMKKRK
2	244	248	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-127	TALE family protein