PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004432.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 284aa    MW: 31669.1 Da    PI: 6.6708
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004432.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.89.1e-26957149
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                           krienks rqvtfskRr+g++KKA  LSvLCd+++avi+fs  gklye 
  Cse_sc004432.1_g060.1  9 KRIENKSSRQVTFSKRRTGLMKKARHLSVLCDVDIAVIVFSALGKLYES 57
                           79*********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRKKLEMKR IENKSSRQVT FSKRRTGLMK KARHLSVLCD VDIAVIVFSA LGKLYESCSG  60
SSSNSVEHML SRYERSIIEE GERTNNGAGG QSEVLSQCTK FRTCKELLQT VDRLVEENNS  120
EELSVTDMTE LELELDAALV QTRLRKVIVR CYLFNSVSQA VTVLYGISIS LGTIRKLSIG  180
FEWPIIHDEI ICTTQQKFMM NKGKRPDQVD SSNMIDTVDD GVHVVPPGRG MLEKKLTADK  240
EELDNQVESA KQLQNDDGGG GLNNLATNQT NSPQHLVTLP LFNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30260.18e-31MIKC_MADS family protein