PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004429.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 356aa MW: 40188.1 Da PI: 8.4638

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004429.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.4	1.5e-35	27	119	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl+k+y++++d+ +++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg Cse_sc004429.1_g020.1 27 FLTKTYQLVDDPITDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKG 105 9***************************************************************99.........******* PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 +k+ll++i+r+k++ Cse_sc004429.1_g020.1 106 EKHLLCEIHRRKTS 119 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MALMMDNNSC DGILLSLDSH KSMPAPFLTK TYQLVDDPIT DHIVSWGEDD TTFVVWRPPE 60 FARDLLPNYF KHNNFSSFVR QLNTYGFRKI VPDRWEFANE FFKKGEKHLL CEIHRRKTSQ 120 PQVVGLNHHH FTGINGGIGG NSFFSYPSTR DSISPPNSDD DSPPPFSSPT TTVTPTTGIF 180 SIFSSQNGIS TNTRGSYNSV TALSEDNERL RRSNNMLMSE LAHMRKLYND VIYFVQNHVK 240 PVTPSNSFPL LVHKQQSQPT SFFNGGNNGN NANATVVYPS KPQQLQFHDS TMDNNVRDQD 300 KVNGTTRTKL FGVPLLSKKR MHPEYGNANT VVETHKARLI LEKDDLGLKL MPPSTC

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MALMMDNNSC DGILLSLDSH KSMPAPFLTK TYQLVDDPIT DHIVSWGEDD TTFVVWRPPE  60
FARDLLPNYF KHNNFSSFVR QLNTYGFRKI VPDRWEFANE FFKKGEKHLL CEIHRRKTSQ  120
PQVVGLNHHH FTGINGGIGG NSFFSYPSTR DSISPPNSDD DSPPPFSSPT TTVTPTTGIF  180
SIFSSQNGIS TNTRGSYNSV TALSEDNERL RRSNNMLMSE LAHMRKLYND VIYFVQNHVK  240
PVTPSNSFPL LVHKQQSQPT SFFNGGNNGN NANATVVYPS KPQQLQFHDS TMDNNVRDQD  300
KVNGTTRTKL FGVPLLSKKR MHPEYGNANT VVETHKARLI LEKDDLGLKL MPPSTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	5e-69	HSF family protein