PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004340.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 282aa    MW: 31681.7 Da    PI: 9.0415
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004340.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.4e-134185147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           r++WT  E+e++++a +++  + Wk+I + +g  +t+ q++s+ qky
  Cse_sc004340.1_g030.1 41 RQNWTDIEHEKFLEALQLFDRD-WKKIEAFIG-SKTAIQIRSHAQKY 85
                           89******************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGFDHCVNSD TGGVNSVLSL EDMDSNNKKR VRKPYTITKS RQNWTDIEHE KFLEALQLFD  60
RDWKKIEAFI GSKTAIQIRS HAQKYFLKVQ KSGTNEHVPP PRPKRKAAHP YPLKAKNDAT  120
NVGATPQSSS DLIKPENTIT TDSYMWPIAQ PDVATEDDAR LHNSCSSSID TGPGVWQASE  180
ANNHQQVKHR MAGRVMPDFP NVYRFIGGVF DPNESNHLQK LKMMDPVDVE TVVLLMKNLC  240
ANLKSPQFED YRKLFSSYDP GTGKVTSNGS FQALLRNAIT SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.16e-75MYB_related family protein