PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004275.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 847aa MW: 94597.4 Da PI: 7.8322

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004275.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.8	1.4e-16	376	474	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ + ++d +g++W+++++y +++s++yvl+ G + + ++++gD+ +F++ Cse_sc004275.1_g010.1 376 FEKVLSASDAGRIGRLVLPKACAEAYfpVINTSEGVPVNVRDVKGKEWTFQFRYwpNNNSRMYVLE-GVFSCIQHMQMEAGDTAIFSR 462 99************************777889999*************899999999.*******************5 PP -SSSEE..EEEEE- CS B3 85 dgrsefelvvkvfr 98 + + + ++ +r Cse_sc004275.1_g010.1 463 LN-PGDK-LILGCR 474 54.3333.444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MHSILCMLHS PPSTHRQSPS NLRQLSFSRS IAVKLPGLTI KKIWENNDDD VIEGVCEWVV 60 WNDNDESVEE RLGYESWWFC FFVLFLWCRT AFDNLRYCER FHLNEAGWRE CKFCEKPIHC 120 GCIVSKYLYE CLDSGGIACM RCMRAKGTQP FSAPSLANKI PNGYTRFSGS WHPSVFTNRM 180 NNSTLTPLTE GLDKSQHACL ASSIGQPFRL DEELPSYKEF GARCSSSKDI NLSLRSFPTQ 240 LPLPTVPDNN KPSLGSQPMY EPVYQQSLGF SFGNESSSVV PTSNGVVEGN LVLEKVPSIK 300 QEQKPRQMVP KLSKSGASIR SQSNKETGSD NRVARPPGEG RGRSQLLPRY WPRMTDQELL 360 QISGDLNFDC TITPLFEKVL SASDAGRIGR LVLPKACAEA YFPVINTSEG VPVNVRDVKG 420 KEWTFQFRYW PNNNSRMYVL EGVFSCIQHM QMEAGDTAIF SRLNPGDKLI LGCRKAIVAT 480 DASALPNPVN GDLPASDPVL PKIMDEDTSK LYSEQKSVIQ EKKKTRNIGS KSKRLHMHSE 540 DAMELKFTWE EAQEFLRPPS EPTVVMIENC ELEEYDEPPV FGKKTMFTTN ASRLQEQWVQ 600 CDSCSKWRKL PSDALIPSKW TCYDNVSDPN RCSCSTPEER GAADLEQISK RGKESKTQKL 660 VGKWGTKEQK QQPTGLDALA SVAILGANDS ENGNSIVGPT TRHPRHRPGC SCIVCIQPPS 720 GKGKHKPNCL CNACATVRRR FKTMMQRKKN RQVEQEAEKV KLLVPVINTT EPDDTLGTGT 780 GPEMPTESSD KGQGLDLNFD PKEEGTMLAA SRTPPVWQNV LGGRVPNVTS DLKNGPAQTI 840 NNVVEGI

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MHSILCMLHS PPSTHRQSPS NLRQLSFSRS IAVKLPGLTI KKIWENNDDD VIEGVCEWVV  60
WNDNDESVEE RLGYESWWFC FFVLFLWCRT AFDNLRYCER FHLNEAGWRE CKFCEKPIHC  120
GCIVSKYLYE CLDSGGIACM RCMRAKGTQP FSAPSLANKI PNGYTRFSGS WHPSVFTNRM  180
NNSTLTPLTE GLDKSQHACL ASSIGQPFRL DEELPSYKEF GARCSSSKDI NLSLRSFPTQ  240
LPLPTVPDNN KPSLGSQPMY EPVYQQSLGF SFGNESSSVV PTSNGVVEGN LVLEKVPSIK  300
QEQKPRQMVP KLSKSGASIR SQSNKETGSD NRVARPPGEG RGRSQLLPRY WPRMTDQELL  360
QISGDLNFDC TITPLFEKVL SASDAGRIGR LVLPKACAEA YFPVINTSEG VPVNVRDVKG  420
KEWTFQFRYW PNNNSRMYVL EGVFSCIQHM QMEAGDTAIF SRLNPGDKLI LGCRKAIVAT  480
DASALPNPVN GDLPASDPVL PKIMDEDTSK LYSEQKSVIQ EKKKTRNIGS KSKRLHMHSE  540
DAMELKFTWE EAQEFLRPPS EPTVVMIENC ELEEYDEPPV FGKKTMFTTN ASRLQEQWVQ  600
CDSCSKWRKL PSDALIPSKW TCYDNVSDPN RCSCSTPEER GAADLEQISK RGKESKTQKL  660
VGKWGTKEQK QQPTGLDALA SVAILGANDS ENGNSIVGPT TRHPRHRPGC SCIVCIQPPS  720
GKGKHKPNCL CNACATVRRR FKTMMQRKKN RQVEQEAEKV KLLVPVINTT EPDDTLGTGT  780
GPEMPTESSD KGQGLDLNFD PKEEGTMLAA SRTPPVWQNV LGGRVPNVTS DLKNGPAQTI  840
NNVVEGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	738	749	RRRFKTMMQRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-180	B3 family protein