PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004182.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HSF | ||||||||
Protein Properties | Length: 188aa MW: 21835.4 Da PI: 6.1555 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 74 | 2.7e-23 | 29 | 90 | 2 | 62 |
HHHHHHHHHCTGGG..TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTE CS HSF_DNA-bind 2 Flkklyeiledeel..keliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgF 62 Fl+k+y++ledee ++++sw+e+g+ fvv+ ++ef++++Lp yFkh+nf+SF+RQLn+Y F Cse_sc004182.1_g010.1 29 FLSKTYDLLEDEEHirSRIVSWNEEGSGFVVWSPDEFSEQILPIYFKHNNFSSFIRQLNTY-F 90 9*********88743389*******************************************.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MAADHPNEPP TTSKRSTVTS FKTKHPAPFL SKTYDLLEDE EHIRSRIVSW NEEGSGFVVW 60 SPDEFSEQIL PIYFKHNNFS SFIRQLNTYF RKGCEHLLME ITRKKCEPSA FPQYLKPSSG 120 DTTSSNNNLQ TPSSSSMEEE NMLLLLDENK NLKRDNMELQ MQIQHYKSLE IKLSECASQY 180 MGSNHQYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 2e-30 | HSF family protein |