PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004137.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 879aa MW: 98553.7 Da PI: 6.613 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.4 | 8.3e-30 | 73 | 131 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v +tY+ +Hnh+ Cse_sc004137.1_g010.1 73 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPSMVMVTYSCDHNHS 131 69*************************998****************************7 PP | |||||||
2 | WRKY | 94.3 | 8.6e-30 | 661 | 719 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v++tY+ +Hnh+ Cse_sc004137.1_g010.1 661 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMVIVTYSCDHNHT 719 69*************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 879 aa Download sequence |
MKHGFNMVDH EDHDYSPENS EDSPSCGMFN DTKTTSTSSS KGSIRSVQKR VVSVPINGIE 60 GSRPKGETNA LPSDSWAWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV ERSRADPSMV 120 MVTYSCDHNH SSPGSRHNKY QHLLDNVVSP REVSTSMATK EVSNTKDQEK DGPNLRKQSI 180 PGPDSRFTGL EAGRGAPFVG TTDQFRWFSD LDTLSSTMLE SPLMAADMVE NADMAMIFSM 240 REDDDSLFAD LGELPECSTV FRRSGDRVTW SHGVGQKGDN RWIWRFLNAQ SDLWVQVIKC 300 TYGRHGGISS NPNNSLKRSP CGAILSLVNN LKHQGIDLFS LCSRKVGNGL DSLFWDDTWY 360 GEQPLKTAFP RIYNLDTDKN CNIASRVSLA DWSLVLRRTP RGGVEANQFQ DLLNITRGII 420 LSDNRDSWLW TVDSAKGYSV ASARSLVDSF FLGSGSNSSR WNRNVPIKVN VLLWRAMLNK 480 LPSRVNLVRR GIDVDSLLCP ICLGDLETVN HSFFNCGLAK DLWYLLAKWW EMDIPVCGTF 540 TDWFEWLDSL HVPTKVRLVL EGVGGTLMWS IWNFHDTTKI CGDNSIMEYG YSLLDHEDQD 600 YSPENSEDSR SPSSALFNDT KTTSTSSPKR SRRSKQKRVV SVPITEIEGY RHKGETNAPP 660 SDSWAWRKYG QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRADPTMVIV TYSCDHNHTS 720 PASRNHNNHH HHNNVISSRE VSSPTTTEEE VSNTDDQEDD DPNQCKRSIP GPDSRFTSLE 780 VGPDAPFVAT IDQFGWFSDF DSPSSTMLES PLMAGDIVGD SDMAMIFSIR EEDESLFADL 840 GELPECSTVF RRSGDRATWS HGVGQKGDNR VSSEAWLCK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 632 | 638 | RRSKQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 6e-63 | WRKY family protein |