PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004137.1_g010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 879aa    MW: 98553.7 Da    PI: 6.613
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004137.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.3e-3073131259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v +tY+ +Hnh+
  Cse_sc004137.1_g010.1  73 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPSMVMVTYSCDHNHS 131
                            69*************************998****************************7 PP

2WRKY94.38.6e-30661719259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v++tY+ +Hnh+
  Cse_sc004137.1_g010.1 661 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMVIVTYSCDHNHT 719
                            69*************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    
MKHGFNMVDH EDHDYSPENS EDSPSCGMFN DTKTTSTSSS KGSIRSVQKR VVSVPINGIE  60
GSRPKGETNA LPSDSWAWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV ERSRADPSMV  120
MVTYSCDHNH SSPGSRHNKY QHLLDNVVSP REVSTSMATK EVSNTKDQEK DGPNLRKQSI  180
PGPDSRFTGL EAGRGAPFVG TTDQFRWFSD LDTLSSTMLE SPLMAADMVE NADMAMIFSM  240
REDDDSLFAD LGELPECSTV FRRSGDRVTW SHGVGQKGDN RWIWRFLNAQ SDLWVQVIKC  300
TYGRHGGISS NPNNSLKRSP CGAILSLVNN LKHQGIDLFS LCSRKVGNGL DSLFWDDTWY  360
GEQPLKTAFP RIYNLDTDKN CNIASRVSLA DWSLVLRRTP RGGVEANQFQ DLLNITRGII  420
LSDNRDSWLW TVDSAKGYSV ASARSLVDSF FLGSGSNSSR WNRNVPIKVN VLLWRAMLNK  480
LPSRVNLVRR GIDVDSLLCP ICLGDLETVN HSFFNCGLAK DLWYLLAKWW EMDIPVCGTF  540
TDWFEWLDSL HVPTKVRLVL EGVGGTLMWS IWNFHDTTKI CGDNSIMEYG YSLLDHEDQD  600
YSPENSEDSR SPSSALFNDT KTTSTSSPKR SRRSKQKRVV SVPITEIEGY RHKGETNAPP  660
SDSWAWRKYG QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRADPTMVIV TYSCDHNHTS  720
PASRNHNNHH HHNNVISSRE VSSPTTTEEE VSNTDDQEDD DPNQCKRSIP GPDSRFTSLE  780
VGPDAPFVAT IDQFGWFSDF DSPSSTMLES PLMAGDIVGD SDMAMIFSIR EEDESLFADL  840
GELPECSTVF RRSGDRATWS HGVGQKGDNR VSSEAWLCK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1632638RRSKQKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.16e-63WRKY family protein