PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc004025.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 730aa MW: 79904.9 Da PI: 6.8917 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.2 | 7.1e-33 | 296 | 353 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k Cse_sc004025.1_g030.1 296 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHNHPK 353 8****************************************.***************85 PP | |||||||
2 | WRKY | 36.2 | 1.2e-11 | 499 | 520 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vkg+++pr Cse_sc004025.1_g030.1 499 LDDGYRWRKYGQKVVKGNPNPR 520 59*******************9 PP | |||||||
3 | WRKY | 50.2 | 5e-16 | 540 | 583 | 16 | 59 |
TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 16 kgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 k s++ sYY+Cts+gC+v+k+ver+++d k v++tYeg+Hnh+ Cse_sc004025.1_g030.1 540 KYSKMDVSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHD 583 5678889************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 730 aa Download sequence |
MGGLDDHGGI IGDWMAPSPS PRSFFAAMLG ETDVGSRTVP EPPKFDNNND GGFTFPGPNR 60 QVMSEIGDKN QSGQMGNQVM KSGEFGEQKP SSRAGLVERM AARAGHNAPR LNTDIVKPSD 120 ASQNQQSQSP YLTIPPGLSP TSLLDSPVFL SNSLAQPSPT TGKFQFPPNG NSNGNGRSSL 180 MFSDSSNRSK DNFFEEPNNT SFAFKPFPNS APFLRGHVSE VNPSPPFMSA QSFQHNEAFA 240 QSEKQFQPQK IEPNQNYSLP IGNLEGSQKH LKEHHDDDAD QRTSGDIANA NSASADDGYN 300 WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSHEGHI TEIIYKGAHN HPKLGPNRRS 360 GNGSSGVLSD MQGDVNEQGG NDVDGGLVWG SNMQHKGSNH WGQENNLEVT SSGLIMQGQN 420 SGQFESSDAV DGSTTFSNDE EEDDRATHGS VSLSYDGEGD ESESKRRKVE AYAADVTGAT 480 RAIREPRVVV QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR LSFCAVLCGL LFNLDVEYFK 540 YSKMDVSYYK CTSTGCTVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHANNNNNNN 600 HTMAAQTLSM QSQLHMPEPS RMQNHMARFQ RPPYGLPGGQ HMGTNQSHGY GFAMNQQRPG 660 GLAQMAMANQ GQQHMGPTPT HGYGYAMNQH LGFMVPKGEP KVEPMSDPGL NLANGATLYQ 720 QMTNRLPLGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-144 | WRKY family protein |