PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003924.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 347aa MW: 37182.7 Da PI: 5.667

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003924.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77.5	1.7e-24	253	315	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L +eN++L++el++l++e+ kl+se+ Cse_sc003924.1_g020.1 253 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVEALNSENHSLRDELQRLSDECGKLTSEN 315 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGAGEQSSPA KQSKPTTTQE TPPPLSYPDW QSSMQAYYGS GAAPPFFAST VASPPPHPYM 60 WGGHQHPMMP PYGTPVPYPA MYPPAGVYGH PTMPMTPGAV QPNTEMEAKA PNGKDRVNKK 120 SKGASGNSNA GVRNGESGKT ASSSGNDGAT QSAESENDGS SDGSDEDDQQ EYSGGKKGSF 180 HQMLADASAR NNVSGPNGQT AVPGNPVVGS MPAANLNMGM DLWNPSAGTG NMKMQPNQTV 240 ATPMLADQWV QDERELKRQK RKQSNRESAR RSRLRKQAEC EELQARVEAL NSENHSLRDE 300 LQRLSDECGK LTSENNSIKD ELTRFFGPEA VSKLDAHLQS QTNEGDS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGAGEQSSPA KQSKPTTTQE TPPPLSYPDW QSSMQAYYGS GAAPPFFAST VASPPPHPYM  60
WGGHQHPMMP PYGTPVPYPA MYPPAGVYGH PTMPMTPGAV QPNTEMEAKA PNGKDRVNKK  120
SKGASGNSNA GVRNGESGKT ASSSGNDGAT QSAESENDGS SDGSDEDDQQ EYSGGKKGSF  180
HQMLADASAR NNVSGPNGQT AVPGNPVVGS MPAANLNMGM DLWNPSAGTG NMKMQPNQTV  240
ATPMLADQWV QDERELKRQK RKQSNRESAR RSRLRKQAEC EELQARVEAL NSENHSLRDE  300
LQRLSDECGK LTSENNSIKD ELTRFFGPEA VSKLDAHLQS QTNEGDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	276	RRSRLRK
2	270	277	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-101	bZIP family protein