PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003807.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 488aa MW: 53959.6 Da PI: 4.8844

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003807.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	304	349	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YI++L Cse_sc003807.1_g010.1 304 NHVEAERQRREKLNQRFYALRSVVPNV-----SRMDKASLLADAVCYISEL 349 799*********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDDLIVSSSS SSSIVSIPST AINPNQCDTL QQKLQTLLQN QPQPWAYAIF WQTFNDDSNG 60 CVSLSWGDGH FLSSNDTLPD SFLPDSDLDC RKSVVREIKA LLGPDNREDA EWFYVISLTR 120 SFMPGDGSVP GTALGSNSMI WLSGVDQLQS FSCERAKEAQ VHGLETMVCI PTCNGVVEMG 180 SYHFIEETWN LAHQAQSLFG FGGGSTKFNE LNDGHHNIVS FADMVIMASG LHDEQDEGIT 240 PDDEMSKNGG MLCTNMNNAV VTNTYIETGS EQSDSDCQLV LATTENSFQK KKGKHTRGRC 300 PPVNHVEAER QRREKLNQRF YALRSVVPNV SRMDKASLLA DAVCYISELK QKVECLESQL 360 QHRNNNQGKI KKVKTELPHT TDNTCNLYVS TKPTLKNNNK ANMNKMTSGF GEIEVKIVGE 420 DAMIRVQSGN SDLPSAKLTD ALREMKGQIQ HASMSCVNDI MLQDVVVRIP GATDSDELKS 480 DLIRILDL

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDDLIVSSSS SSSIVSIPST AINPNQCDTL QQKLQTLLQN QPQPWAYAIF WQTFNDDSNG  60
CVSLSWGDGH FLSSNDTLPD SFLPDSDLDC RKSVVREIKA LLGPDNREDA EWFYVISLTR  120
SFMPGDGSVP GTALGSNSMI WLSGVDQLQS FSCERAKEAQ VHGLETMVCI PTCNGVVEMG  180
SYHFIEETWN LAHQAQSLFG FGGGSTKFNE LNDGHHNIVS FADMVIMASG LHDEQDEGIT  240
PDDEMSKNGG MLCTNMNNAV VTNTYIETGS EQSDSDCQLV LATTENSFQK KKGKHTRGRC  300
PPVNHVEAER QRREKLNQRF YALRSVVPNV SRMDKASLLA DAVCYISELK QKVECLESQL  360
QHRNNNQGKI KKVKTELPHT TDNTCNLYVS TKPTLKNNNK ANMNKMTSGF GEIEVKIVGE  420
DAMIRVQSGN SDLPSAKLTD ALREMKGQIQ HASMSCVNDI MLQDVVVRIP GATDSDELKS  480
DLIRILDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	8e-78	bHLH family protein