PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003732.1_g110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 256aa MW: 28887.6 Da PI: 9.9422 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5e-15 | 47 | 89 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g+W++ Ede l ++v+++G++ W+ I + ++ gR++k c+ rw+ Cse_sc003732.1_g110.1 47 KGPWSPKEDEMLQNLVEKHGPN-WSVIGKFIP-GRSAKTCRVRWF 89 79******************77.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MESDESGVIK LKNKTSLSKY RLRRKKGLRL AMSSVNNSQK KDMDPIKGPW SPKEDEMLQN 60 LVEKHGPNWS VIGKFIPGRS AKTCRVRWFS SPQVMPFTPE EDHTILLSHA YYGDKWVSIA 120 KKLTGRPYDV IQNHWNSTLK WKSSSMTNEA KIPPPFVSDI NCGQGNSYIC DCNLSLAVAP 180 SISDMTRDNM SSGGTHSYSS DHSAPSRDAL RKRDSSQIMS DSDNSSEVSS FEPVRPSQLN 240 RVSFEKRAKM SRFFEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 3e-41 | MYB family protein |