PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003554.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 281aa    MW: 31426.6 Da    PI: 9.28
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003554.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.92.1e-12555146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                           +++WT+eE++ l  +v+++G+g Wk I +          R+  ++k++w++
  Cse_sc003554.1_g090.1  5 KQKWTQEEEDALRAGVAKHGTGKWKNIQKDPEfnphlYSRSNIDLKDKWRN 55
                           79***********************************9************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGNPKQKWTQ EEEDALRAGV AKHGTGKWKN IQKDPEFNPH LYSRSNIDLK DKWRNMSVSA  60
NGQAPREKAR TPKPKGADSP ATPMPISQVP GSSSVAIVPA DPVPTDVIME DSSKCLLDGK  120
TASKYNAMIY EALSTLKDPN GSDTSAIVSF IEQRHEVNSN FRRQLTSRLR RLVQQEKLEK  180
VQNCYRLRRE ALNGTRDPIP KPKEIRPRLS PTNYHLGETL EEAAVAAAYK VAEAENKSFV  240
AAEAVKELER VTRMAEEAEA FLQLVQQIYE RCATGEVVKV Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.22e-64MYB_related family protein