PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003477.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 809aa MW: 89962.9 Da PI: 6.771

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003477.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.4e-18	289	385	1	95
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +Lk+gD+v+F++ Cse_sc003477.1_g040.1 289 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLKAGDTVTFSR 375 99************************555567778***********99899999999.*******************7 PP -SSSEE..EEE CS B3 85 dgrsefelvvk 95 ++ e++l+++ Cse_sc003477.1_g040.1 376 ME-PEGKLLMG 385 76.66666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MDTRRCMNEL CGALLAADDD NDDYKSGWPL RSSGDFAKLC NKCGTAYEQL AFCELFHQAD 60 TGWRDCSSCG KRLHCGCIAS SAFIELLNNG SVRCVSCISN SRHDPSTSDD KPEECGVSVE 120 NSVGEIRSSS IKMLKQSCDV TGDNDDASTS QMKQEESLHP RREISESAPG TKVIKYGSLV 180 ETDLTIGLAP SSSSSQKPGF IPIDDREINK QFSAFQQGPW SRQILPKVPK TIMAQGFDPN 240 AMNSQIRVAR PPVEGRIKNQ LLPRYWPRIT EQELQQISGD SNATIVPLFE KVLSASDAGR 300 IGRLVLPKAC AEAYFPPISQ PEGLPLRIQD VKGKEWLFQF RFWPNNNSRM YVLEGVTPCI 360 QSMQLKAGDT VTFSRMEPEG KLLMGSRKAV VTASVQDPRI AAMHSAVFPN DPSLTGVNTI 420 DHLSNMNDYS GLLHSLKRNT DSHLNTLSRN INSPIGDANW HANESNKSRA EPEKKRSRNI 480 GSKSKRLLIE SQDALDLKYT WDELQDMLFP PTQPSTVTID DQEFEEYEEP PVFGKGSIFT 540 VRLSGEQDQW AQCDNCSKWR RLPVDFLLPS KWTCQENLWD QSRSACLAPD ELNPRELEHL 600 LGMAKEFHKW RNTMTTRPDQ EHGASGPNQT DPSIATTTKH PRHRPGCSCI VCSQPPSGKG 660 KHKPNCTCNV CMTVKRRFKT LMLRKQQRQS EREAEIAEKN QLKLGPKNDT EANESRSLGK 720 GLDLNIHPPH RVQDNNTSGT STTHVSMMSL LQAANQPLET YMKQNGLTSL ISEQQASSGS 780 QALAQGSSGC TPTVHEDEPQ GTDHHDNSS

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MDTRRCMNEL CGALLAADDD NDDYKSGWPL RSSGDFAKLC NKCGTAYEQL AFCELFHQAD  60
TGWRDCSSCG KRLHCGCIAS SAFIELLNNG SVRCVSCISN SRHDPSTSDD KPEECGVSVE  120
NSVGEIRSSS IKMLKQSCDV TGDNDDASTS QMKQEESLHP RREISESAPG TKVIKYGSLV  180
ETDLTIGLAP SSSSSQKPGF IPIDDREINK QFSAFQQGPW SRQILPKVPK TIMAQGFDPN  240
AMNSQIRVAR PPVEGRIKNQ LLPRYWPRIT EQELQQISGD SNATIVPLFE KVLSASDAGR  300
IGRLVLPKAC AEAYFPPISQ PEGLPLRIQD VKGKEWLFQF RFWPNNNSRM YVLEGVTPCI  360
QSMQLKAGDT VTFSRMEPEG KLLMGSRKAV VTASVQDPRI AAMHSAVFPN DPSLTGVNTI  420
DHLSNMNDYS GLLHSLKRNT DSHLNTLSRN INSPIGDANW HANESNKSRA EPEKKRSRNI  480
GSKSKRLLIE SQDALDLKYT WDELQDMLFP PTQPSTVTID DQEFEEYEEP PVFGKGSIFT  540
VRLSGEQDQW AQCDNCSKWR RLPVDFLLPS KWTCQENLWD QSRSACLAPD ELNPRELEHL  600
LGMAKEFHKW RNTMTTRPDQ EHGASGPNQT DPSIATTTKH PRHRPGCSCI VCSQPPSGKG  660
KHKPNCTCNV CMTVKRRFKT LMLRKQQRQS EREAEIAEKN QLKLGPKNDT EANESRSLGK  720
GLDLNIHPPH RVQDNNTSGT STTHVSMMSL LQAANQPLET YMKQNGLTSL ISEQQASSGS  780
QALAQGSSGC TPTVHEDEPQ GTDHHDNSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein