PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003214.1_g050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 501aa    MW: 55922.1 Da    PI: 6.6123
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003214.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.25.8e-22133193259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            dDg++WrKYGqKe+ ++++ rsYYrCt++   gC+++k+v++  + p   +itY g+H+++
  Cse_sc003214.1_g050.1 133 DDGHAWRKYGQKEILNTKHQRSYYRCTYKldqGCQATKQVQKIGDKPPNYKITYFGNHTCK 193
                            8***************************9999***************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MGSPNWPESL PSNRIKAIQT LIQGEEWINK LQDVYHCSDK VEPDSKLVDV VAVQILAMFE  60
NTLSFIGGSH SSNESLQHPT SDLQSSCTLN GLKSEISDES PKSTVIPVKM KRGCYKRRKD  120
SWTSTKVTSV LIDDGHAWRK YGQKEILNTK HQRSYYRCTY KLDQGCQATK QVQKIGDKPP  180
NYKITYFGNH TCKNLQRAPP IILDSTDPTD TSIFLNFETP KEIIEMKQVN PYFPTMIHEH  240
EEAFPSIGDS NHKRSLPSNA YHFCDSFAHA SHSPLDSIIV MPSGMDHEDR RGFFSQEKRG  300
VKLKMGVNAV NSSMNVGEQE DVVTTSNISF EQTGPLSGAI NNSEEDMNSK ISNYEKLILE  360
GKPVFLDEDG KPMTSGGTTQ SCVHVPDPTD NDVPRVTIDD SDKFEAIKGE SLSSKGQTSP  420
ERLKTKSSVI TAIQKGFAAA LAVLKPERLK KDNTDCHMVD LLDRSLMPPT KSLFDVGSRR  480
LSIFIVNMLS YHSDVLEIPQ G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-40WRKY family protein