PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003214.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 501aa MW: 55922.1 Da PI: 6.6123 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 69.2 | 5.8e-22 | 133 | 193 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqKe+ ++++ rsYYrCt++ gC+++k+v++ + p +itY g+H+++ Cse_sc003214.1_g050.1 133 DDGHAWRKYGQKEILNTKHQRSYYRCTYKldqGCQATKQVQKIGDKPPNYKITYFGNHTCK 193 8***************************9999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence |
MGSPNWPESL PSNRIKAIQT LIQGEEWINK LQDVYHCSDK VEPDSKLVDV VAVQILAMFE 60 NTLSFIGGSH SSNESLQHPT SDLQSSCTLN GLKSEISDES PKSTVIPVKM KRGCYKRRKD 120 SWTSTKVTSV LIDDGHAWRK YGQKEILNTK HQRSYYRCTY KLDQGCQATK QVQKIGDKPP 180 NYKITYFGNH TCKNLQRAPP IILDSTDPTD TSIFLNFETP KEIIEMKQVN PYFPTMIHEH 240 EEAFPSIGDS NHKRSLPSNA YHFCDSFAHA SHSPLDSIIV MPSGMDHEDR RGFFSQEKRG 300 VKLKMGVNAV NSSMNVGEQE DVVTTSNISF EQTGPLSGAI NNSEEDMNSK ISNYEKLILE 360 GKPVFLDEDG KPMTSGGTTQ SCVHVPDPTD NDVPRVTIDD SDKFEAIKGE SLSSKGQTSP 420 ERLKTKSSVI TAIQKGFAAA LAVLKPERLK KDNTDCHMVD LLDRSLMPPT KSLFDVGSRR 480 LSIFIVNMLS YHSDVLEIPQ G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 5e-40 | WRKY family protein |