PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003168.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 504aa    MW: 55808.4 Da    PI: 6.2815
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003168.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-30244303159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Cse_sc003168.1_g040.1 244 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGNHNHP 303
                            58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    
MAREEDNTQT EMDLTLKLDA QDQEPASNDS SQSDHHDDDH DKKVESPHEL EVQESKNDVE  60
TPTTPTEASE RQDLDHHHQE KLSMLQTEMN RIKEENKVLR QVVEQTMKDY YDLQMKFSII  120
QQSSNGIKLQ DPKCFLSLNG HDGNQETKKI SPRSSPLEES ENEELGLSLR IQSNTTTSQH  180
VRDHQEENHE SSTRFMPMQQ SNLINPGNFS GDIKANNIAN NPIASMPNRK ARVSVRARCE  240
AATMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGNH  300
NHPLPVGATA MASTTSAAAA SFMLLDSNNH TSTTSAAAAP FNNYHMSSNI MNPNSSPYSS  360
THVRTMNPND HSKGIVFDLT NNPMNPHHIP NSSNTPHLGF PWMPNKVPNG SQFLRPRQVD  420
GTSGVWEGGE DSNNNNKSIL AENMSAIASH PNFRVAVAAA ISSIINKESQ TTNNIHADGP  480
KDRESGGSSS GGKAWVLESL SRSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.19e-66WRKY family protein