PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003168.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 504aa MW: 55808.4 Da PI: 6.2815 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.1 | 2.4e-30 | 244 | 303 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Cse_sc003168.1_g040.1 244 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGNHNHP 303 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence |
MAREEDNTQT EMDLTLKLDA QDQEPASNDS SQSDHHDDDH DKKVESPHEL EVQESKNDVE 60 TPTTPTEASE RQDLDHHHQE KLSMLQTEMN RIKEENKVLR QVVEQTMKDY YDLQMKFSII 120 QQSSNGIKLQ DPKCFLSLNG HDGNQETKKI SPRSSPLEES ENEELGLSLR IQSNTTTSQH 180 VRDHQEENHE SSTRFMPMQQ SNLINPGNFS GDIKANNIAN NPIASMPNRK ARVSVRARCE 240 AATMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGNH 300 NHPLPVGATA MASTTSAAAA SFMLLDSNNH TSTTSAAAAP FNNYHMSSNI MNPNSSPYSS 360 THVRTMNPND HSKGIVFDLT NNPMNPHHIP NSSNTPHLGF PWMPNKVPNG SQFLRPRQVD 420 GTSGVWEGGE DSNNNNKSIL AENMSAIASH PNFRVAVAAA ISSIINKESQ TTNNIHADGP 480 KDRESGGSSS GGKAWVLESL SRSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 9e-66 | WRKY family protein |