PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003139.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 314aa    MW: 35350.8 Da    PI: 5.1809
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003139.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.13.5e-32202257156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W++eLH+rFv+a+e+LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  Cse_sc003139.1_g020.1 202 KQRRCWSTELHRRFVNALEELGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 257
                            79****************************************************97 PP
2Myb_DNA-binding44.73.1e-14204255148
                            TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  W+te++ ++v+a ++lGg    t+k I + m+  g+t  ++ks++qky+
  Cse_sc003139.1_g020.1 204 RRCWSTELHRRFVNALEELGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 255
                            568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGSFNLSHEL NFDYKPSFLP KTITSFLEEV SKFGNVTEKV LKLDDFLNLL ETEKSKVEAF  60
KQELPLCMLL INDAIVALKE ESNVLKKSLH VEPVLEEFIP LKNSCDAKVE IVANENDNGD  120
KKNWLRSTHL WNTNENLETV EEKEERRAVF SPEIKNLMKG NGLLTEINGD SKLIQCSTPN  180
VQTNARIGGI VPLPSQQQTS RKQRRCWSTE LHRRFVNALE ELGGSQVATP KQIRELMQVD  240
GLTNDEVKSH LQKYRLHTRR SSSTNQSSLA VGGGLCMSKG GNSQSGSPDG PLTNGENNMD  300
DEEEEKSENY CWNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.13e-53G2-like family protein