PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003092.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 802aa MW: 89435.5 Da PI: 6.2629

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003092.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	24.3	6.3e-08	337	362	16	42
TCR 16 kYCeCfaagkkCseeCkCedCkNkeek 42 kYCeCfa+g +C+ C+C +C+N+ e+ Cse_sc003092.1_g060.1 337 KYCECFASGIYCDG-CNCVNCHNNVEN 362 8***********.******9875 PP
2	TCR	50.4	4.4e-16	407	446	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e Cse_sc003092.1_g060.1 407 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 446 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence
MRAKVEAANE VQQKMQQDQG KSINEAAQLF SEVLARRQSQ FRQQREIEKA SKPPNKSKKK 60 MYLFKYIRYS GEDRRTLKQL NQFSWETLQR LADIIQKRFL DFKPMQDDDI VERSQPIWSY 120 KRPSEEGAPS TAPKRLKASD EDEGGLTEEE LSRMMIIEAP EEALYTEPIN TRCPIINWDI 180 YTEDGKRHWR IHKAGGRTSA YLYLVDLFAF IDMEDLLKLW ELVKDRFKNR DPYNDKDLEL 240 LYELQNIFEP NSSGEQWKFQ PGDEALRWTL IDSCRLHLVT TCNGTDIYML VERTCPLALG 300 TLLQMLTAGL RMGNAVEMAK ELLIKIFDQA GRPSRGKYCE CFASGIYCDG CNCVNCHNNV 360 ENEPARRDAI ETTLERNPNA FRPKIASSPH GNRDNREEAG EPIVLGKHNK GCHCKKSGCL 420 KKYCECFQAN ILCSENCKCM DCKNFEGSDE RQALFHGDSV HNMAFLQQAA NAAITGAVGS 480 SGYGSPPVSR KRKAQELYFG APLEKDNSSH RLAPFQQMNH IRTTSAPSSL MSPIPGSRVV 540 NAAPVGPSKF VYKSLLADLI RPEDPKELTS VLVVYAHEAA KMCAEEQREK STDASASKDR 600 IQSQKESDTD KVVADEPSAG AQADKTSPDE STSDGADGSK GRPMSPGTLA LMCDEQDTVF 660 TTSTSNGLGP GSADDPSQLP NGQVVTETYA AQEKIVLTAF RDCLNRLITF GELKETQCSS 720 LARNDSGSQS QTEVIQNNTT ATHISQPTIQ HGPFSNGFPR SGVLAPQGGN AAVGTFENNG 780 THLRIPFRAE NGESKPKPEN ER

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence

MRAKVEAANE VQQKMQQDQG KSINEAAQLF SEVLARRQSQ FRQQREIEKA SKPPNKSKKK  60
MYLFKYIRYS GEDRRTLKQL NQFSWETLQR LADIIQKRFL DFKPMQDDDI VERSQPIWSY  120
KRPSEEGAPS TAPKRLKASD EDEGGLTEEE LSRMMIIEAP EEALYTEPIN TRCPIINWDI  180
YTEDGKRHWR IHKAGGRTSA YLYLVDLFAF IDMEDLLKLW ELVKDRFKNR DPYNDKDLEL  240
LYELQNIFEP NSSGEQWKFQ PGDEALRWTL IDSCRLHLVT TCNGTDIYML VERTCPLALG  300
TLLQMLTAGL RMGNAVEMAK ELLIKIFDQA GRPSRGKYCE CFASGIYCDG CNCVNCHNNV  360
ENEPARRDAI ETTLERNPNA FRPKIASSPH GNRDNREEAG EPIVLGKHNK GCHCKKSGCL  420
KKYCECFQAN ILCSENCKCM DCKNFEGSDE RQALFHGDSV HNMAFLQQAA NAAITGAVGS  480
SGYGSPPVSR KRKAQELYFG APLEKDNSSH RLAPFQQMNH IRTTSAPSSL MSPIPGSRVV  540
NAAPVGPSKF VYKSLLADLI RPEDPKELTS VLVVYAHEAA KMCAEEQREK STDASASKDR  600
IQSQKESDTD KVVADEPSAG AQADKTSPDE STSDGADGSK GRPMSPGTLA LMCDEQDTVF  660
TTSTSNGLGP GSADDPSQLP NGQVVTETYA AQEKIVLTAF RDCLNRLITF GELKETQCSS  720
LARNDSGSQS QTEVIQNNTT ATHISQPTIQ HGPFSNGFPR SGVLAPQGGN AAVGTFENNG  780
THLRIPFRAE NGESKPKPEN ER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-135	CPP family protein