PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002982.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-X1

Protein Properties

Length: 1063aa MW: 115053 Da PI: 8.0838

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002982.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	19.7	1.8e-06	385	403	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG H+C+++CH+G C pC+ Cse_sc002982.1_g090.1 385 CGLHRCKETCHPGSCAPCR 403 ******************6 PP
2	zf-NF-X1	17.8	7.4e-06	485	504	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C++ CH G CppC++ Cse_sc002982.1_g090.1 485 CGQHDCESFCHSGYCPPCQE 504 ******************85 PP
3	zf-NF-X1	19.6	1.9e-06	595	610	1	16
zf-NF-X1 1 CGkHkCqklCHeGpCp 16 CG+H+C+++CH+ pC+ Cse_sc002982.1_g090.1 595 CGMHSCSRTCHPSPCD 610 ***************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1063 aa Download sequence
MSSYQARDRR PRYSNSNHRQ AWIQRGPTTA ATTPTVVTTT ARDANTAPSS NSNSQNVNNR 60 RRDDRVSKED LPQLVQEIQE KLLKGTIECM ICYDMVRRSA PVWSCSSCFS IFHLHCTKKW 120 ARAPTSIDLS AEKNQGFNWR CPGCQSVQLT SFKEIRYVCF CGKRQDPPSD PYLTPHSCGE 180 PCGKALDKDL AAAASYDDDE GDHCRHSCVV QCHPGPCPPC KAYAPPRICP CGKKTIALRC 240 SDQSQKSNIT CGQRCGKPLN CQRHCCFKTC HVGPCDSCDV KINASCFCKK KTDEVVVCGD 300 VAVKGHVNVV RDGLFSCNLS CEKTLGCGNH VCIETCHPGV CGDCELLPGR ITSCYCGKSS 360 LEEERKSCLD PIPTCSKICD KTLSCGLHRC KETCHPGSCA PCRVMVTQKC RCGSTSRTVE 420 CFNTTTMMEG DATFRCDKPC GRKKSCGRHR CSDKCCPLSN SKNNAPVQGR DPHLCSMPCE 480 KKRRCGQHDC ESFCHSGYCP PCQEMIFTDL TCACGRSSIP PPLPCGTPPP SCQYPCSVPQ 540 PCGHVSSHSC HFGDCPPCPV PIAKECIGGH FVLRNIPCGS KDIRCNKVCG KTRQCGMHSC 600 SRTCHPSPCD SSSSSSGGST SAGAVKLSCG QTCGAPRRDC RHTCTSLCHP HNTCPDVRCE 660 FPVTITCSCG RITATVPCDA GGNNNTSGYN ADTALEAFAI QKLPAPLQPD EANGKRTPLG 720 QRKLVCDDEC SKLERKKVLA DAFGVNTSLE ALHFGESSAV SDMIGDLFRR DPKWVLSIEE 780 RCKMLVLGRI RGAVKVHVFC PMLKEKRDAV KLIAERWKLS IRAVGWEPKR FIVVHVTPKS 840 KTPSRILGSK GLNPSNLIQP PALDPLVDMD PRLVVALFDL PGDADVSALV LRFGGECELV 900 WLNDKNALAV FSDPTRAATA MRRLDHGSVY HGAAVLSTAN GGTSATGGTS NVWGGSGVPA 960 TNPWKKAVAA SSDSWSGAPE PVINNPWKVK ENPIIASATA SSANRWSALE SEDARTNVTT 1020 QEVSGKVVAA TNVASSKNEP ASSSASLLKQ DDDVVENWEE AYD

Sequence ? help Back to Top

Protein Sequence Length: 1063 aa Download sequence

MSSYQARDRR PRYSNSNHRQ AWIQRGPTTA ATTPTVVTTT ARDANTAPSS NSNSQNVNNR  60
RRDDRVSKED LPQLVQEIQE KLLKGTIECM ICYDMVRRSA PVWSCSSCFS IFHLHCTKKW  120
ARAPTSIDLS AEKNQGFNWR CPGCQSVQLT SFKEIRYVCF CGKRQDPPSD PYLTPHSCGE  180
PCGKALDKDL AAAASYDDDE GDHCRHSCVV QCHPGPCPPC KAYAPPRICP CGKKTIALRC  240
SDQSQKSNIT CGQRCGKPLN CQRHCCFKTC HVGPCDSCDV KINASCFCKK KTDEVVVCGD  300
VAVKGHVNVV RDGLFSCNLS CEKTLGCGNH VCIETCHPGV CGDCELLPGR ITSCYCGKSS  360
LEEERKSCLD PIPTCSKICD KTLSCGLHRC KETCHPGSCA PCRVMVTQKC RCGSTSRTVE  420
CFNTTTMMEG DATFRCDKPC GRKKSCGRHR CSDKCCPLSN SKNNAPVQGR DPHLCSMPCE  480
KKRRCGQHDC ESFCHSGYCP PCQEMIFTDL TCACGRSSIP PPLPCGTPPP SCQYPCSVPQ  540
PCGHVSSHSC HFGDCPPCPV PIAKECIGGH FVLRNIPCGS KDIRCNKVCG KTRQCGMHSC  600
SRTCHPSPCD SSSSSSGGST SAGAVKLSCG QTCGAPRRDC RHTCTSLCHP HNTCPDVRCE  660
FPVTITCSCG RITATVPCDA GGNNNTSGYN ADTALEAFAI QKLPAPLQPD EANGKRTPLG  720
QRKLVCDDEC SKLERKKVLA DAFGVNTSLE ALHFGESSAV SDMIGDLFRR DPKWVLSIEE  780
RCKMLVLGRI RGAVKVHVFC PMLKEKRDAV KLIAERWKLS IRAVGWEPKR FIVVHVTPKS  840
KTPSRILGSK GLNPSNLIQP PALDPLVDMD PRLVVALFDL PGDADVSALV LRFGGECELV  900
WLNDKNALAV FSDPTRAATA MRRLDHGSVY HGAAVLSTAN GGTSATGGTS NVWGGSGVPA  960
TNPWKKAVAA SSDSWSGAPE PVINNPWKVK ENPIIASATA SSANRWSALE SEDARTNVTT  1020
QEVSGKVVAA TNVASSKNEP ASSSASLLKQ DDDVVENWEE AYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein