PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002608.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 391aa MW: 44236 Da PI: 6.6192

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002608.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.7	1.7e-07	341	373	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + Cse_sc002608.1_g040.1 341 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 373 59*****************************87 PP
2	ELK	28.9	2.5e-10	294	315	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Cse_sc002608.1_g040.1 294 ELKHELKQGYKEKIVDIREEIL 315 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MSFHDEMALH HYSDHHHLPE NIDTILPPPS DHHSPKTSQS PPPTWLNSAI LSQHNNSYTT 60 HADVTTSPTN FLHLQTTNSD SSNSNWLSPR VTTSLDHHRE SSSMFGAPDS NNNNDSSIAN 120 EQHKLSQRGV NGNGSERNWE FVKCKADILS HPMYDQLLSA HVSCLRIATP VDQLPRIDAQ 180 LAQSDQVVAK YSVFGNHNQP VDDKELNQFM AHYVVLLSSF KEQLQQHVRV HAMEAVMACV 240 APGEGTGATM SDDDEEQVDS DANLFDGGLD VSDSMGFGLP TESERSLMER VRQELKHELK 300 QGYKEKIVDI REEILRKRRA GKLPGDTTSL LKAWWQSHSK WPYPTEEDKA RLVQETGLQL 360 KQINNWFINQ RKRNWHSNPS SSTAVKSKRK K

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MSFHDEMALH HYSDHHHLPE NIDTILPPPS DHHSPKTSQS PPPTWLNSAI LSQHNNSYTT  60
HADVTTSPTN FLHLQTTNSD SSNSNWLSPR VTTSLDHHRE SSSMFGAPDS NNNNDSSIAN  120
EQHKLSQRGV NGNGSERNWE FVKCKADILS HPMYDQLLSA HVSCLRIATP VDQLPRIDAQ  180
LAQSDQVVAK YSVFGNHNQP VDDKELNQFM AHYVVLLSSF KEQLQQHVRV HAMEAVMACV  240
APGEGTGATM SDDDEEQVDS DANLFDGGLD VSDSMGFGLP TESERSLMER VRQELKHELK  300
QGYKEKIVDI REEILRKRRA GKLPGDTTSL LKAWWQSHSK WPYPTEEDKA RLVQETGLQL  360
KQINNWFINQ RKRNWHSNPS SSTAVKSKRK K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	371	391	RKRNWHSNPSSSTAVKSKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-156	TALE family protein