PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002437.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

E2F/DP

Protein Properties

Length: 355aa MW: 39565.4 Da PI: 7.6636

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002437.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.7	7.4e-27	114	193	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +++ei+wkg Cse_sc002437.1_g040.1 114 NRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfrepcdgtpeqqqyDEKNIRRRVYDALNVLMAMDIISK-DRKEIQWKG 193 689*****...*999*************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MVINKNQENA KTPSRGGGAT RSWGTTGSGQ SISGSSSIGS PSTRIEPTMA VTPSSASTKL 60 KLNSFESHGD VGNKRLSAFV FKDEEMYSAF VFKDEEISNK RKRVQRASGP DKGNRGLRQF 120 SMKVCEKVES KGRTTYNEVA DELVAEFREP CDGTPEQQQY DEKNIRRRVY DALNVLMAMD 180 IISKDRKEIQ WKGLPNSNLN DVHELKREHL ALRSRIDKKA AYLKELQDQH VGLQNLVQRN 240 EQLCRSGDAP NGGVALPFIL VQTRPHATVE VEISEDMQLV HFDFNTTPFE LHDDNYVLKQ 300 MKLCGQSASD DMANDVSTNG GEGSSISSMA TMQSERPSIS HPVPGILKPR LKHEH

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MVINKNQENA KTPSRGGGAT RSWGTTGSGQ SISGSSSIGS PSTRIEPTMA VTPSSASTKL  60
KLNSFESHGD VGNKRLSAFV FKDEEMYSAF VFKDEEISNK RKRVQRASGP DKGNRGLRQF  120
SMKVCEKVES KGRTTYNEVA DELVAEFREP CDGTPEQQQY DEKNIRRRVY DALNVLMAMD  180
IISKDRKEIQ WKGLPNSNLN DVHELKREHL ALRSRIDKKA AYLKELQDQH VGLQNLVQRN  240
EQLCRSGDAP NGGVALPFIL VQTRPHATVE VEISEDMQLV HFDFNTTPFE LHDDNYVLKQ  300
MKLCGQSASD DMANDVSTNG GEGSSISSMA TMQSERPSIS HPVPGILKPR LKHEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-122	E2F/DP family protein