PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002411.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 341aa MW: 38400.4 Da PI: 9.4108

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002411.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.1	1.8e-14	164	208	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er+RR+++N++f++Lr+l+P+ K +Ka++L ++eYI+ L Cse_sc002411.1_g070.1 164 HVIAERKRREKLNESFQTLRSLIPPG-----SKKDKASVLSNTMEYISFL 208 889*******************95.....599************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MDNSVENSPF LFNMLHSTPY MSEMFALTEP HMDQQSPNQK PQSTTILRSE DPLRQAIEQI 60 RTSLSIPSRE HEEAAMTRAF LAVITSTSSP TPSSSFPYQR QPPRVASAFK RHGSSNLGPI 120 KQRVPNRQNL HRKSLSFFQN LSEARAQRDQ MVQTTGPTSY QFLHVIAERK RREKLNESFQ 180 TLRSLIPPGS KKDKASVLSN TMEYISFLTS QVEELNKRNR ILETGQHAGK EPPNEGSRRF 240 SGKGPVVGIT DIGESTSESR VVDLEVNARG NVILVDLVMS VLEFIKQTEN VSVMSIDAGT 300 RMLETEAIAN RVILRLRIQG NECDKSSFEE AVRRLLDDLA Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	173	ERKRRE
2	169	174	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-46	bHLH family protein