PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002409.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GATA | ||||||||
Protein Properties | Length: 150aa MW: 16549.1 Da PI: 10.6561 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 62.4 | 5.4e-20 | 19 | 52 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C+t kTplWR gp g+k+LCnaCG++++kkg Cse_sc002409.1_g040.1 19 CTDCNTAKTPLWRAGPAGPKSLCNACGIRFKKKG 52 ********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MESSSMNCEE TSTKTDKVCT DCNTAKTPLW RAGPAGPKSL CNACGIRFKK KGPRQPSPPS 60 SSSSTTVGSR SRSDACDEET KDGKFRKKLR IKLLALGKEV VLIQRPRSPM KKVVRKQIRN 120 IRFQNQYKNL GEVEQAAHLL MSLSCGSVFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-21 | GATA family protein |