PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002406.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27616 Da PI: 7.9339 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 9.2e-17 | 51 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +kGVr++ +grWv+eIrd + r +lg+f +a eAa+a++ a+++++g Cse_sc002406.1_g060.1 51 TFKGVRQRT-WGRWVSEIRDN-----HgSRQWLGTFNSAHEAAQAYDSAARRIFG 99 69****999.**********3.....35************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MSSVLNARNN GGGRDGNDGE KRKVNKKRAA HASPRKGCMK GKGGPLNASC TFKGVRQRTW 60 GRWVSEIRDN HGSRQWLGTF NSAHEAAQAY DSAARRIFGA NACFNLPTSE VATQPSASRR 120 AVATAVARCH QQLFLENQIK QEIEKHNQKQ KEMEIEMYKN MINPQQDQVT NNHIEKPVKT 180 VVEERISFAS TFNKLNENLP EFDDTEMWEE AASIMDFHTE AMCDPGIAAY DFGDAMGIEL 240 NHPLMM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 2e-37 | ERF family protein |