PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002161.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 359aa MW: 40009 Da PI: 7.1883

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002161.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl Cse_sc002161.1_g060.1 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	62.4	9e-20	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg g+tl+++ks++qky+ Cse_sc002161.1_g060.1 48 RLKWTPDLHERFIEAVNQLGGAdkaTPKSVLKLMGiPGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MQMYQHHQGK NIHSSSRMSI TPERHLFLQG GNGGGDSGLV LSTDAKPRLK WTPDLHERFI 60 EAVNQLGGAD KATPKSVLKL MGIPGLTLYH LKSHLQKYRL SKNLYRQTNS GGSNKIDMVA 120 PSRDTIGETS EIHMSNSSVS PQTNKNLQIS EAIQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ 180 GKYLQSVLEK AQETLGRQNL GTVGLEAAKV QLSELVSKVS TQCLNSAFSG IKDVSTQTNQ 240 PTDCSIESCL TYGEGQQTDQ EMIGLTLLKS KKVDSEPKHV WCESDLSMSV GGLKSRSYPE 300 ERFMGRDENV ISMDQTNTDS VKPENVEMPY YGQKLDLNAH DGNDAASTRK HFDLNGLSW

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MQMYQHHQGK NIHSSSRMSI TPERHLFLQG GNGGGDSGLV LSTDAKPRLK WTPDLHERFI  60
EAVNQLGGAD KATPKSVLKL MGIPGLTLYH LKSHLQKYRL SKNLYRQTNS GGSNKIDMVA  120
PSRDTIGETS EIHMSNSSVS PQTNKNLQIS EAIQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ  180
GKYLQSVLEK AQETLGRQNL GTVGLEAAKV QLSELVSKVS TQCLNSAFSG IKDVSTQTNQ  240
PTDCSIESCL TYGEGQQTDQ EMIGLTLLKS KKVDSEPKHV WCESDLSMSV GGLKSRSYPE  300
ERFMGRDENV ISMDQTNTDS VKPENVEMPY YGQKLDLNAH DGNDAASTRK HFDLNGLSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-118	G2-like family protein