PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002160.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

E2F/DP

Protein Properties

Length: 452aa MW: 49930.6 Da PI: 4.6002

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002160.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.1	2.6e-27	141	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+g+++ln++a++L dv ++RRiYDi+NVLe+++liekk kn+irwkg Cse_sc002160.1_g020.1 141 RYDSSLGLLTKKFINLLKHAEDGVLDLNNAAETL---DV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 206 6899****************************.....****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSEGNREMAA PPSANGGGGQ ILQRRLPFTS TKPPFVPVDD YHRFNDVNRT DQQQQQMVVV 60 DEGITVKSPQ VKRKLGTAYN EVSSNDWGSV GYTTTISSPL HTPAKGGRGA GRPKGGKNKT 120 APQTPVSNTG SPAPLTPGSC RYDSSLGLLT KKFINLLKHA EDGVLDLNNA AETLDVQKRR 180 IYDITNVLEG IGLIEKKLKN RIRWKGLDDS KPGELENDIS LLQAEVQKLS MEENRLDERI 240 REMQEKMRDM SEDNANQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVDY 300 PQRRYRIILR STMGPIDVYL VSQFEEKFED ANGADQTMVA PVASCSGSDN NPEVTIETQP 360 QHAHSTNTDT NLPEDSPSRI MRIVPSDSDN NEDYWLLSDR EVPLTDIWNT ELPEWDGVDL 420 LSEEFGLAEV GTPRANTLPS GAPAAPVNGA PR

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSEGNREMAA PPSANGGGGQ ILQRRLPFTS TKPPFVPVDD YHRFNDVNRT DQQQQQMVVV  60
DEGITVKSPQ VKRKLGTAYN EVSSNDWGSV GYTTTISSPL HTPAKGGRGA GRPKGGKNKT  120
APQTPVSNTG SPAPLTPGSC RYDSSLGLLT KKFINLLKHA EDGVLDLNNA AETLDVQKRR  180
IYDITNVLEG IGLIEKKLKN RIRWKGLDDS KPGELENDIS LLQAEVQKLS MEENRLDERI  240
REMQEKMRDM SEDNANQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVDY  300
PQRRYRIILR STMGPIDVYL VSQFEEKFED ANGADQTMVA PVASCSGSDN NPEVTIETQP  360
QHAHSTNTDT NLPEDSPSRI MRIVPSDSDN NEDYWLLSDR EVPLTDIWNT ELPEWDGVDL  420
LSEEFGLAEV GTPRANTLPS GAPAAPVNGA PR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-147	E2F/DP family protein