PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001999.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 555aa MW: 60721.9 Da PI: 7.0109

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001999.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.3e-30	216	275	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+ Cse_sc001999.1_g040.1 216 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCPQDMSILITTYEGTHNHP 275 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MEVDLRNTTE VKHEDNGDDR HDCEQEDEKQ FELTKAEMGE VKEENQRLRV HLDQILKDYQ 60 TLQKKFQDII HQQQQETPTT INANAIKQNE EPQINDESEL VSLSLGRTSS IDIVKKDKRS 120 TTPPTKSAEG LGLGLECGKF EISSTTQAES SINLSPDNSL EEAKDEAGET WTPQKPPTPK 180 RSGDDQEVSQ QNPAKKTRVS VRVRCDTPTG FFYSQMNDGC QWRKYGQKIA KGNPCPRAYY 240 RCTVSPTCPV RKQVQRCPQD MSILITTYEG THNHPLPVSA TAMASTTSAA ASMLTSGSST 300 SGSNSNPHPS TSSHGLNFYL NEHSKLKPIY LPHSSMSPSP SCPTVTLDLT SNTLSTSSPY 360 NYRSTHMNTT FPPRYSTTNL NFSSLESNAL PLAWSNGTLN YGKSQNGSLN FGSTQPQESI 420 YHSYMQNKNM MATTSNTNQH SLQPDTIEAA TKAITSNPNF QSVLQAALKS IIGGGAMGGQ 480 VGGDKSSQNV KVGDTFPVFS SFPSNSNANK CSSTFFNKSV ATTAMNSQPT GSNSLPFSSS 540 RSKSTSPETS RDHVV

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MEVDLRNTTE VKHEDNGDDR HDCEQEDEKQ FELTKAEMGE VKEENQRLRV HLDQILKDYQ  60
TLQKKFQDII HQQQQETPTT INANAIKQNE EPQINDESEL VSLSLGRTSS IDIVKKDKRS  120
TTPPTKSAEG LGLGLECGKF EISSTTQAES SINLSPDNSL EEAKDEAGET WTPQKPPTPK  180
RSGDDQEVSQ QNPAKKTRVS VRVRCDTPTG FFYSQMNDGC QWRKYGQKIA KGNPCPRAYY  240
RCTVSPTCPV RKQVQRCPQD MSILITTYEG THNHPLPVSA TAMASTTSAA ASMLTSGSST  300
SGSNSNPHPS TSSHGLNFYL NEHSKLKPIY LPHSSMSPSP SCPTVTLDLT SNTLSTSSPY  360
NYRSTHMNTT FPPRYSTTNL NFSSLESNAL PLAWSNGTLN YGKSQNGSLN FGSTQPQESI  420
YHSYMQNKNM MATTSNTNQH SLQPDTIEAA TKAITSNPNF QSVLQAALKS IIGGGAMGGQ  480
VGGDKSSQNV KVGDTFPVFS SFPSNSNANK CSSTFFNKSV ATTAMNSQPT GSNSLPFSSS  540
RSKSTSPETS RDHVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	8e-63	WRKY family protein