PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001895.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 253aa MW: 28290.9 Da PI: 6.4377 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77 | 4.5e-24 | 11 | 154 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.. 77 p G +F+P+d el+ e+L++k+ + ++++ i+++d i++++P++Lp ++++ ++ + F k++ +y +g+rk+r+ Cse_sc001895.1_g030.1 11 PIGTKFDPSDVELL-EHLAAKCGVGNeephvyIDVF--IPTIDvdegICYTHPENLP-GARKDGNSFHLFYKTKYAYGKGQRKRRKih 94 89************.999999876665665443333..5555444559*********.555678899******************856 PP NAM 78 .....tksgy.Wkatgkdkevlsk.kgelvglkktLvfykg.rapkg.ektdWvmheyrl 128 +++ y W++tg+++ +++k l g kk++v+y+ + +g +k dWvmhey+l Cse_sc001895.1_g030.1 95 hetssASNVYrWHKTGRTNLIINKeAPLLSGYKKIFVLYETiTGVSGrHKLDWVMHEYHL 154 76555234446**********997344459*********643333331699*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MKVSDEWPGF PIGTKFDPSD VELLEHLAAK CGVGNEEPHV YIDVFIPTID VDEGICYTHP 60 ENLPGARKDG NSFHLFYKTK YAYGKGQRKR RKIHHETSSA SNVYRWHKTG RTNLIINKEA 120 PLLSGYKKIF VLYETITGVS GRHKLDWVMH EYHLGSVKYE KEGELVVSKI FHRLTSLETP 180 IQAEAQSDDN VNLNDAAEAA GSNAILNSSI RQDNVKSSVD TNYAAEAIIY PTIETADLAV 240 ISLAILITKS LET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 6e-52 | NAC family protein |