PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001740.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 332aa    MW: 36919.3 Da    PI: 5.4001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001740.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-10154197755
                            HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + Er+RR+ +++++  Lr l+P+      +K++Ka+i+  A +YI++Lq
  Cse_sc001740.1_g070.1 154 ISERKRRSGMKEKLYALRALVPNI-----TKMDKASIVGDAARYIHDLQ 197
                            67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MEYSIGHFDN SNFSMFQPDI TQETNFEHLI SAIQCESTDS DEKFCLDYEC NHFTNACMAM  60
QLLPQLYGHN EASDGIGNGN FNNCNASDTG NDNGIGIGFY DVMDPNLNAI WNQEEVDVKV  120
FGDDDSSETV TTRNPDTQRR SGGGVKGDRT RTLISERKRR SGMKEKLYAL RALVPNITKM  180
DKASIVGDAA RYIHDLQTQA RNLRSELATI EATKNHQMSS QNSSKTHLSK SLPILKKISK  240
MDISNVEEKG YYVKLVCNKG RGVAVALHKA LESITSFQVQ CSNLATAGDN FVLTFILNVT  300
TCEFDISLPN LKLWLSGAFL NQGFEFSTFP SP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-67bHLH family protein