PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001738.1_g080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 297aa MW: 33042.4 Da PI: 7.0171 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.5 | 2.4e-32 | 148 | 205 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+ Cse_sc001738.1_g080.1 148 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSQDPTTVITTYEGQHCHH 205 8******************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MDDDTNKVDP ITGELSTSEA TWTFPGDYSY FSNDVRENNV LNEFGWSFYP PPPVFDQIDS 60 NSPLQEVGVG EFASSGVQGG GDVSMMSNPS SSNSEDRPEA SSTASGDFIS GDGVPPEKPG 120 KVNKKKGPKR IRQPRFAFMT KSEIDHLEDG YRWRKYGQKA VKNSPFPRSY YRCTNSKCTV 180 KKRVERSSQD PTTVITTYEG QHCHHTVGFP RGLTTPYDSA FARQLAPSLA LQPVNYSRQQ 240 FTDHVHAIGS SQPRPQLVSN ESEDHLSHKL PQASTQVSNI DQGLLGDIVP PRMRRHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 5e-58 | WRKY family protein |