PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001646.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 223aa    MW: 24777.3 Da    PI: 5.7991
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001646.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.53e-4071071100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 
                            +C aCk+lrrkC+k+Cv+apyf++eq + +fa++h++FGasnv+kll++lp ++r++a+++++yeA+ar++dP+yG+v++i++lqqq+
  Cse_sc001646.1_g030.1   7 PCGACKFLRRKCVKGCVFAPYFCHEQgATHFAAIHRVFGASNVSKLLAHLPVSDRSEAAATIAYEAQARVQDPIYGCVSHIFALQQQV 94 
                            7*************************89************************************************************ PP

                 DUF260  88 eqlkaelallkee 100
                             +l+++la+lke+
  Cse_sc001646.1_g030.1  95 VSLQSQLASLKEQ 107
                            ********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTGSGSPCGA CKFLRRKCVK GCVFAPYFCH EQGATHFAAI HRVFGASNVS KLLAHLPVSD  60
RSEAAATIAY EAQARVQDPI YGCVSHIFAL QQQVVSLQSQ LASLKEQAGQ RQPNVPMCSD  120
NSNYTNGRNP SSYQQAQNIN DWFHQTENSC MNMPQFDPNS MNGVMNYENS LQKEEDGSFS  180
SFEEGSSYSI DSFDMQISSN QQQWGFRDHG EDLQSVAFGY NHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.11e-49LBD family protein