PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001452.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 483aa MW: 53321.6 Da PI: 6.4136

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001452.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.7e-09	316	363	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Cse_sc001452.1_g070.1 316 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 363 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MSKDGFFNTL PQSWNSMFGM ELDSQVNEMN LFNHNWENSM DQSDPFESAL SSIVSSPVNS 60 HPGGTGIRTP VPGCHAGGES VVLKELIGRL GSICNSGEIS PESCIHGNNN TNNNSTNTSC 120 YTTPLNSPPK LNLSMNHRNH HQLPMIPSDP GFVERAARFS CFGSAKEGEF QHMVESGKMS 180 RVSSNQSFIK TGGLVSRLSM NLNSDNKEVD HSVEESSLSE QINGSETGIK GRKRKVISKG 240 KLKEAQVENK AVAESEKEES DAKRSKSDEE GNGIEPEKEK EKTEGNQKQT KENAKLPEPP 300 KDYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKVTGKAV MLDEIINYVQ 360 SLQRQVEFLS MKLATVNPRT DVNMEALLSK DTFHSRASMP NTMNHMEASA QPFYGMVNDG 420 PENSLMAMMH HGSNMKLSQI DGFSEASAFW ENDLQSVVQM GFGQNQGPSF HGTMGSGQMK 480 VEL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MSKDGFFNTL PQSWNSMFGM ELDSQVNEMN LFNHNWENSM DQSDPFESAL SSIVSSPVNS  60
HPGGTGIRTP VPGCHAGGES VVLKELIGRL GSICNSGEIS PESCIHGNNN TNNNSTNTSC  120
YTTPLNSPPK LNLSMNHRNH HQLPMIPSDP GFVERAARFS CFGSAKEGEF QHMVESGKMS  180
RVSSNQSFIK TGGLVSRLSM NLNSDNKEVD HSVEESSLSE QINGSETGIK GRKRKVISKG  240
KLKEAQVENK AVAESEKEES DAKRSKSDEE GNGIEPEKEK EKTEGNQKQT KENAKLPEPP  300
KDYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKVTGKAV MLDEIINYVQ  360
SLQRQVEFLS MKLATVNPRT DVNMEALLSK DTFHSRASMP NTMNHMEASA QPFYGMVNDG  420
PENSLMAMMH HGSNMKLSQI DGFSEASAFW ENDLQSVVQM GFGQNQGPSF HGTMGSGQMK  480
VEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	8e-89	bHLH family protein