PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001425.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 334aa    MW: 37629.9 Da    PI: 4.7715
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001425.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.69.2e-27203258359
                            -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            Dg+nWrKYGqK+vk+ + +rsYY+Ct+++C +kk +e s++++++++i+Y+g+H+h+
  Cse_sc001425.1_g080.1 203 DGFNWRKYGQKQVKSPQGSRSYYKCTHNECDAKK-IESSDQNNSITKIVYKGQHKHD 258
                            9*******************************98.*********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDDDNNNNNE NNETDQSSEA TQNFEIIHRQ NDDVSEQEHD SSYHYNNHDE FVVGDDVDDE  60
DYDVTNLPID DDEEYDDDDE RIISSYLSDN ENETLASSGL ADVPVQYEMR QDELEHLKNQ  120
LQGSHQEALA IVIAQASQSH TGNKVQLPLS STPISTLPII NKQRETPSTE GNSVNVRVAE  180
GNKKVSSDPK TVSNSKTVKT PIDGFNWRKY GQKQVKSPQG SRSYYKCTHN ECDAKKIESS  240
DQNNSITKIV YKGQHKHDPP KKVISRRGKI LSASSKAQER RTVSTLGPRQ YKSSGSVSNG  300
LILVEEMDAP PPKKRQVTEA IINFWNFCLK SNQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.12e-24WRKY family protein